RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 UGT3A2Q3SY77 523 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 FAM153CQ494X1 144 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 C10orf107Q8IVU9 208 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 DEPDC4Q8N2C3 294 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 FAM71CQ8NEG0 241 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 SFXN5Q8TD22 340 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 PIMREGQ9BSJ6 248 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 TXLNGYQ9BZA5 131 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 SLC7A10Q9NS82 523 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 MKLN1Q9UL63 735 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 MOKQ9UQ07 419 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 URI1O94763 535 aaPredicted RBP20.46■□□□□ 0.87
MMP28-203ENST00000612672 SLU7O95391 586 aaKnown RBP20.46■□□□□ 0.87
MMP28-203ENST00000612672 CPA3P15088 417 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 CHRNB3Q05901 458 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 PCLAFQ15004 111 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 CR1LQ2VPA4 569 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 SPDYE7PQ495Y7 208 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 HMGN2P46Q86SG4 172 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 TWIST2Q8WVJ9 160 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 C1orf50Q9BV19 199 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 PMF1-BGLAPU3KQ54 211 aa20.46■□□□□ 0.87
MMP28-203ENST00000612672 MRPL33O75394 65 aaKnown RBP20.45■□□□□ 0.86
MMP28-203ENST00000612672 PMS2P2O95744 297 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 CSTAP01040 98 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 PGRP06401 933 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 TFPIP10646 304 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 IL2RGP31785 369 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 PGM1P36871 562 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 HBA1P69905 142 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 CARTPTQ16568 116 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 WHAMMP3Q1A5X7 153 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 CCDC153Q494R4 210 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 TSPO2Q5TGU0 170 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 OR7E24Q6IFN5 339 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 CASP12Q6UXS9 341 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 TRMT10CQ7L0Y3 403 aaKnown RBP20.45■□□□□ 0.86
MMP28-203ENST00000612672 DDIASQ8IXT1 998 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 SLC25A43Q8WUT9 341 aaPredicted RBP20.45■□□□□ 0.86
MMP28-203ENST00000612672 BPESC1Q9GZL8 116 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 SERINC1Q9NRX5 453 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 CHRNA9Q9UGM1 479 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 FLVCR1Q9Y5Y0 555 aa20.45■□□□□ 0.86
MMP28-203ENST00000612672 LRP5LA4QPB2 252 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 KIAA0513O60268 411 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 TGFAP01135 160 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 KRT16P08779 473 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 H3F3AP84243 136 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 XKR7Q5GH72 579 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 PIGXQ8TBF5 258 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 COQ8BQ96D53 544 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 C3orf30Q96M34 536 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 TRMOQ9BU70 441 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 ZNF350Q9GZX5 532 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 FKRPQ9H9S5 495 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 DCTN4Q9UJW0 460 aa20.44■□□□□ 0.86
MMP28-203ENST00000612672 NDUFS8O00217 210 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 PEX11AO75192 247 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 ZNF23P17027 643 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 ITGA2P17301 1181 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 PGCP20142 388 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 CRHR1P34998 444 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 SOAT1P35610 550 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 FUT5Q11128 374 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 HIKESHIQ53FT3 197 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 EMBQ6PCB8 327 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 ADGRG3Q86Y34 549 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 RIMKLAQ8IXN7 391 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 CCDC63Q8NA47 563 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 AMDHD2Q9Y303 409 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 FKBP7Q9Y680 259 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 MGAM2Q2M2H8 2515 aa20.43■□□□□ 0.86
MMP28-203ENST00000612672 CLDN24A6NM45 220 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 GPR171O14626 319 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 SHBGP04278 402 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 IMPDH2P12268 514 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 CCNA2P20248 432 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 RYKP34925 604 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 APOBEC1P41238 236 aaKnown RBP20.42■□□□□ 0.86
MMP28-203ENST00000612672 OR2B6P58173 313 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 RUNX1T1Q06455 604 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 MEX3DQ86XN8 651 aaKnown RBP20.42■□□□□ 0.86
MMP28-203ENST00000612672 CLECL1Q8IZS7 167 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 C17orf78Q8N4C9 275 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.42■□□□□ 0.86
MMP28-203ENST00000612672 C1orf162Q8NEQ5 155 aaPredicted RBP20.42■□□□□ 0.86
MMP28-203ENST00000612672 TMEM234Q8WY98 164 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 ARL8AQ96BM9 186 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 ZG16BQ96DA0 208 aa20.42■□□□□ 0.86
MMP28-203ENST00000612672 PKD1L1Q8TDX9 2849 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 IGHV1-18A0A0C4DH31 117 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 KLF11O14901 512 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 HNF1AP20823 631 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 MATN1P21941 496 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 ARRB2P32121 409 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 ARHGAP11BQ3KRB8 267 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 TYW3Q6IPR3 259 aaKnown RBP20.41■□□□□ 0.86
MMP28-203ENST00000612672 EIF3MQ7L2H7 374 aaKnown RBP20.41■□□□□ 0.86
MMP28-203ENST00000612672 C6orf120Q7Z4R8 191 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 GSPT2Q8IYD1 628 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 694.4 ms