RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 RNF165Q6ZSG1 346 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 SLC46A3Q7Z3Q1 461 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 RFLNBQ8N5W9 214 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 C1orf162Q8NEQ5 155 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 OR7A2PQ8NGA2 310 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 MSI2Q96DH6 328 aaKnown RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 OR7D2Q96RA2 312 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 SDF2Q99470 211 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 C12orf65Q9H3J6 166 aaKnown RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 EML4Q9HC35 981 aaKnown RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 EXD2Q9NVH0 621 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 MALT1Q9UDY8 824 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 CHRNA9Q9UGM1 479 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 DCTN4Q9UJW0 460 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 FBXO9Q9UK97 447 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-210ENST00000609574 EMCNQ9ULC0 261 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 KCNE3Q9Y6H6 103 aa13.87□□□□□ -0.19
HDDC2-210ENST00000609574 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 EIF1BO60739 113 aaKnown RBP13.86□□□□□ -0.19
HDDC2-210ENST00000609574 C6orf47O95873 294 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 LAMP1P11279 417 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 MATN1P21941 496 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 PAX7P23759 505 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 CRHR1P34998 444 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SOAT1P35610 550 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SRSF2Q01130 221 aaKnown RBP13.86□□□□□ -0.19
HDDC2-210ENST00000609574 RUNX1T1Q06455 604 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SKP2Q13309 424 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 ATAD3BQ5T9A4 648 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 C16orf62Q7Z3J2 963 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 OR2T11Q8NH01 316 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 FOXN4Q96NZ1 517 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SLC17A5Q9NRA2 495 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 GPATCH2Q9NW75 528 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SLC35A3Q9Y2D2 325 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 SLC9A8Q9Y2E8 581 aa13.86□□□□□ -0.19
HDDC2-210ENST00000609574 PLCE1Q9P212 2302 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 SLC35F4A4IF30 521 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 ZNF716A6NP11 495 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 ESPNB1AK53 854 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 COPEO14579 308 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 PLIN3O60664 434 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 KRT33AO76009 404 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 LY6HO94772 140 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
HDDC2-210ENST00000609574 AGR2O95994 175 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 SERPINF1P36955 418 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 HTR3AP46098 478 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 SLC16A1P53985 500 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 SLC35A1P78382 337 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 ZNF141Q15928 474 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 ATP6AP1LQ52LC2 224 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 C9orf135Q5VTT2 229 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 UGT2A3Q6UWM9 527 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 C12orf54Q6X4T0 127 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 ABHD12BQ7Z5M8 362 aaPredicted RBP13.85□□□□□ -0.19
HDDC2-210ENST00000609574 OR52E4Q8NGH9 312 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 PSMA8Q8TAA3 256 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 PMM1Q92871 262 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 PRR14Q9BWN1 585 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 RAB1BQ9H0U4 201 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 PCDHGB4Q9UN71 923 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 TRAPPC4Q9Y296 219 aa13.85□□□□□ -0.19
HDDC2-210ENST00000609574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.191e-11■□□□□ 9.3
HDDC2-210ENST00000609574 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 VWC2LB2RUY7 222 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 B9A039 149 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 TRIM13O60858 407 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 PEX11AO75192 247 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 ITGA5P08648 1049 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 ZNF23P17027 643 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 PRPS1L1P21108 318 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 ECHS1P30084 290 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 RYKP34925 604 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 CR1LQ2VPA4 569 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 FAM153CQ494X1 144 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 KANK2Q63ZY3 851 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 GRINAQ7Z429 371 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 WDR31Q8NA23 367 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 OR5D16Q8NGK9 328 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 OR5AK3PQ8NH89 298 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 TWIST2Q8WVJ9 160 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 OIT3Q8WWZ8 545 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 DDIT4LQ96D03 193 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 BHLHE41Q9C0J9 482 aaPredicted RBP13.84□□□□□ -0.19
HDDC2-210ENST00000609574 TUBB1Q9H4B7 451 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 CTPS2Q9NRF8 586 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 TMEM181Q9P2C4 612 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 MKLN1Q9UL63 735 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 MOKQ9UQ07 419 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 DNAJC15Q9Y5T4 150 aa13.84□□□□□ -0.19
HDDC2-210ENST00000609574 ATP6V1G2-DDX39BF2Z307 99 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 DNAJA2O60884 412 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 CRYAAP02489 173 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 FGF4P08620 206 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 CCNA2P20248 432 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 PCMT1P22061 227 aa13.83□□□□□ -0.2
HDDC2-210ENST00000609574 MPGP29372 298 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms