RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 TSPAN17Q96FV3 270 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 BBS4Q96RK4 519 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 DESI2Q9BSY9 194 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 ZNF416Q9BWM5 594 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 MRPL37Q9BZE1 423 aaKnown RBP12.24□□□□□ -0.45
TRIM11-205ENST00000602308 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 NOL11Q9H8H0 719 aaKnown RBP12.24□□□□□ -0.45
TRIM11-205ENST00000602308 UBQLN4Q9NRR5 601 aa12.24□□□□□ -0.45
TRIM11-205ENST00000602308 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 NR5A2O00482 541 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 SCDO00767 359 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 NKX2-2O95096 273 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 NDUFA7O95182 113 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
TRIM11-205ENST00000602308 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 NCBP2P52298 156 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM11-205ENST00000602308 LCN2P80188 198 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 COL10A1Q03692 680 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 IFT88Q13099 833 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 C3orf36Q3SXR2 165 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 TREML1Q86YW5 311 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 PHOSPHO1Q8TCT1 267 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 HOXB13Q92826 284 aaPredicted RBP12.23□□□□□ -0.45
TRIM11-205ENST00000602308 ELP4Q96EB1 424 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 TCF7L1Q9HCS4 588 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 EQTNQ9NQ60 294 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 AURKAIP1Q9NWT8 199 aaPredicted RBP12.23□□□□□ -0.45
TRIM11-205ENST00000602308 CARD8Q9Y2G2 431 aa12.23□□□□□ -0.45
TRIM11-205ENST00000602308 NOTCH3Q9UM47 2321 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 C5orf63A6NC05 138 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 CCDC188H7C350 402 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 CLPXO76031 633 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 KCNK2O95069 426 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 PDYNP01213 254 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 TIA1P31483 386 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRIM11-205ENST00000602308 ASMTP46597 345 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 ATP4BP51164 291 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
TRIM11-205ENST00000602308 NDUFAF6Q330K2 333 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 C3orf33Q6P1S2 294 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 NOA1Q8NC60 698 aaKnown RBP12.22□□□□□ -0.45
TRIM11-205ENST00000602308 MAGOHBQ96A72 148 aaKnown RBP12.22□□□□□ -0.45
TRIM11-205ENST00000602308 QRSL1Q9H0R6 528 aaKnown RBP12.22□□□□□ -0.45
TRIM11-205ENST00000602308 CMAHPQ9Y471 501 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 RNF114Q9Y508 228 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 TEX264Q9Y6I9 313 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
TRIM11-205ENST00000602308 IGHV2OR16-5A0A0B4J2B6 119 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 TTC36A6NLP5 189 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 ETV2O00321 342 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 HOXA3O43365 443 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 CDC14BO60729 498 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 IGKV3-15P01624 115 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 EVX1P49640 407 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 RAE1P78406 368 aaKnown RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 TRAF3Q13114 568 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 SNTB2Q13425 540 aaKnown RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 WHAMMP3Q1A5X7 153 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 TIGD2Q4W5G0 525 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 OR1K1Q8NGR3 316 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 PIGXQ8TBF5 258 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 ATP6V1E2Q96A05 226 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 DNAJA3Q96EY1 480 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 GPR22Q99680 433 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 NAPGQ99747 312 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
TRIM11-205ENST00000602308 GLIPR2Q9H4G4 154 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 ELOVL6Q9H5J4 265 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 NMRAL1Q9HBL8 299 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 MMP26Q9NRE1 261 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
TRIM11-205ENST00000602308 ARPC4-TTLL3A0A0A6YYG9 625 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 FRS3O43559 492 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 RRP9O43818 475 aaKnown RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 CRYBA1P05813 215 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 GFAPP14136 432 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 TYK2P29597 1187 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 CCNG1P51959 295 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 ALDH18A1P54886 795 aaKnown RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 SUMO3P55854 103 aaPredicted RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 UBE2NP61088 152 aaKnown RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 DAG1Q14118 895 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 QPRTQ15274 297 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 OTUD3Q5T2D3 398 aaPredicted RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 CCNJQ5T5M9 372 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 REP15Q6BDI9 236 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 KRT80Q6KB66 452 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 FIP1L1Q6UN15 594 aaKnown RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 ZNF572Q7Z3I7 529 aaPredicted RBP12.2□□□□□ -0.46
TRIM11-205ENST00000602308 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 C16orf78Q8WTQ4 265 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 ARL5BQ96KC2 179 aa12.2□□□□□ -0.46
TRIM11-205ENST00000602308 RBBP8Q99708 897 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms