RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TMEM234Q8WY98 164 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 NPAS1Q99742 590 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 FBXL2Q9UKC9 423 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 EFCAB9A8MZ26 197 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 GABRB1P18505 474 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 SOX8P57073 446 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 FHL1Q13642 323 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 C6orf141Q5SZD1 244 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 ADGRG3Q86Y34 549 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 IQCF1Q8N6M8 205 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 OR13C2Q8NGS9 318 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 APH1BQ8WW43 257 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 SLC25A19Q9HC21 320 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 RASSF1Q9NS23 344 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 MED17Q9NVC6 651 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 ZNF226Q9NYT6 803 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 SIGLEC7Q9Y286 467 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 CEP295Q9C0D2 2601 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 TRIM64A6NGJ6 449 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 ARGFXA6NJG6 315 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 SAGP10523 405 aaPredicted RBP23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 PRKAR1AP10644 381 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 SPINK2P20155 84 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 CXCR1P25024 350 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 CYB561P49447 251 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 CDC42P60953 191 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 GINS1Q14691 196 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 ABHD17BQ5VST6 288 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 SLC46A3Q7Z3Q1 461 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 DEPDC4Q8N2C3 294 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 GALNT16Q8N428 558 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 RHOXF1Q8NHV9 184 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 TEX47Q8TBZ9 253 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 HDAC2Q92769 488 aaKnown RBP23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 SGTBQ96EQ0 304 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 YTHDF1Q9BYJ9 559 aaKnown RBP23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 PCDHGB6Q9Y5F9 930 aa23.62■■□□□ 1.37
SCAMP4-210ENST00000588555 TMED7-TICAM2A0A0A6YYA0 188 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 HTR3EA5X5Y0 456 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 M0R129 80 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 PTP4A3O75365 173 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 WBP4O75554 376 aaKnown RBP23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 HTR3AP46098 478 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 RRADP55042 308 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 KCTD21Q4G0X4 260 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 CRTC2Q53ET0 693 aaPredicted RBP23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 SLC25A53Q5H9E4 307 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 ACSM5Q6NUN0 579 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 PLCZ1Q86YW0 608 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 OSTF1Q92882 214 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 VDAC3Q9Y277 283 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 TMED7Q9Y3B3 224 aa23.61■■□□□ 1.37
SCAMP4-210ENST00000588555 CFAP47Q6ZTR5 3102 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 LRRN3E7EW58 273 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 PLPPR5Q32ZL2 321 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 POMZP3Q6PJE2 187 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 CCDC103Q8IW40 242 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 PSD4Q8NDX1 1056 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SCNM1Q9BWG6 230 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 OR52D1Q9H346 318 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 G3V3Y1 287 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SNPHO15079 494 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 NPIPB7O75200 414 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SMIM18P0DKX4 95 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 CD96P40200 585 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SMSP52788 366 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SLC27A4Q6P1M0 643 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 OR4K17Q8NGC6 315 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 FANK1Q8TC84 345 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 KTI12Q96EK9 354 aaPredicted RBP23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 C1GALT1C1Q96EU7 318 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SAMD8Q96LT4 415 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 TSSK6Q9BXA6 273 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 TBC1D23Q9NUY8 699 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 IMPAD1Q9NX62 359 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 SPTBN4Q9H254 2564 aa23.6■■□□□ 1.37
SCAMP4-210ENST00000588555 TRAV27A0A087WT01 109 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 TMEM72A0PK05 275 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 SUSD5O60279 629 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 SNX4O95219 450 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 CH25HO95992 272 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 CCNA2P20248 432 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 ZNF41P51814 821 aaPredicted RBP23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 FOXF1Q12946 379 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 TUBA3CQ13748 450 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 CLEC12AQ5QGZ9 265 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 TUBA3EQ6PEY2 450 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 OAFQ86UD1 273 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 LRRC17Q8N6Y2 441 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 LIPHQ8WWY8 451 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 ZNF566Q969W8 418 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 TMEM41AQ96HV5 264 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 ENKD1Q9H0I2 346 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 SACM1LQ9NTJ5 587 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 IL20RAQ9UHF4 553 aa23.59■■□□□ 1.37
SCAMP4-210ENST00000588555 ZC3H12DA2A288 527 aaKnown RBP23.58■■□□□ 1.37
SCAMP4-210ENST00000588555 HCN1O60741 890 aa23.58■■□□□ 1.37
SCAMP4-210ENST00000588555 TRIM3O75382 744 aaPredicted RBP23.58■■□□□ 1.37
SCAMP4-210ENST00000588555 NEURL1O76050 574 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms