RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 CCDC106Q9BWC9 280 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 SERHL2Q9H4I8 314 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 TAS2R16Q9NYV7 291 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 MKLN1Q9UL63 735 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 CENPVL1A0A0U1RR11 272 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 A0A1W2PR80 420 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 ANKRD28O15084 1053 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 DNPH1O43598 174 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
DNMT1-213ENST00000587604 GUSBP08236 651 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 BMP4P12644 408 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 THBS2P35442 1172 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 SOAT1P35610 550 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 PGM1P36871 562 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 CLK1P49759 484 aaKnown RBP12.35□□□□□ -0.43
DNMT1-213ENST00000587604 SLC16A1P53985 500 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 CASP9P55211 416 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 GABRA6Q16445 453 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 AP1ARQ63HQ0 302 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 B3GLCTQ6Y288 498 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 GSPT2Q8IYD1 628 aaKnown RBP12.35□□□□□ -0.43
DNMT1-213ENST00000587604 EIF1ADQ8N9N8 165 aaKnown RBP12.35□□□□□ -0.43
DNMT1-213ENST00000587604 PIGXQ8TBF5 258 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 HTRA1Q92743 480 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 PROX1Q92786 737 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF350Q9GZX5 532 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 EXD2Q9NVH0 621 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 MKS1Q9NXB0 559 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 MALT1Q9UDY8 824 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 CHRNA9Q9UGM1 479 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 SLC35A3Q9Y2D2 325 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
DNMT1-213ENST00000587604 M0R1B8 84 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 PDLIM1O00151 329 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 AGR2O95994 175 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 CSF3P09919 207 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 G6PDP11413 515 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 SERPINB5P36952 375 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 MAGEA8P43361 318 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 EFNA4P52798 201 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 CLDN8P56748 225 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 MAPK14Q16539 360 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 OLIG3Q7RTU3 272 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 C16orf62Q7Z3J2 963 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 CLEC4FQ8N1N0 589 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF563Q8TA94 476 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 C10orf105Q8TEF2 133 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 APOPT1Q96IL0 206 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 ARL5BQ96KC2 179 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 SLC35G5Q96KT7 338 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 MECRQ9BV79 373 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 C1QTNF6Q9BXI9 259 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 MANSC1Q9H8J5 431 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 TRAPPC4Q9Y296 219 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 PMF1-BGLAPU3KQ54 211 aa12.34□□□□□ -0.43
DNMT1-213ENST00000587604 RNF103-CHMP3A0A140T963 221 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 KIAA0513O60268 411 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 ITGA5P08648 1049 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-213ENST00000587604 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-213ENST00000587604 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-213ENST00000587604 H3F3AP84243 136 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 PGS1Q32NB8 556 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 C1QTNF12Q5T7M4 302 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 TYW3Q6IPR3 259 aaKnown RBP12.33□□□□□ -0.44
DNMT1-213ENST00000587604 ADGRG3Q86Y34 549 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 CCDC103Q8IW40 242 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 CLECL1Q8IZS7 167 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 TUBGCP3Q96CW5 907 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 AMBRA1Q9C0C7 1298 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 SAP130Q9H0E3 1048 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 SHARPINQ9H0F6 387 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 OR51I1Q9H343 314 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 FKRPQ9H9S5 495 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 POLE3Q9NRF9 147 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 PARPBPQ9NWS1 579 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 TMEM181Q9P2C4 612 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 ZDHHC2Q9UIJ5 367 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 PCDHGB4Q9UN71 923 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 WDR45Q9Y484 360 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
DNMT1-213ENST00000587604 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
DNMT1-213ENST00000587604 LMX1BO60663 402 aa12.32□□□□□ -0.44
DNMT1-213ENST00000587604 BCAS1O75363 584 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-213ENST00000587604 SKAP2O75563 359 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-213ENST00000587604 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
DNMT1-213ENST00000587604 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms