RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GCAP28676 217 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 CASQ1P31415 396 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 SRP14P37108 136 aaKnown RBP16.18■□□□□ 0.18
TPM1-226ENST00000560959 RPL3P39023 403 aaKnown RBP16.18■□□□□ 0.18
TPM1-226ENST00000560959 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
TPM1-226ENST00000560959 CFAP157Q5JU67 520 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 BHLHB9Q6PI77 547 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 DEF8Q6ZN54 512 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.18■□□□□ 0.18
TPM1-226ENST00000560959 LINC01356Q8N9X3 169 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 OR52E4Q8NGH9 312 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 OR5P2Q8WZ92 322 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 MOAP1Q96BY2 351 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 CCDC106Q9BWC9 280 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 OBP2BQ9NPH6 170 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 UPB1Q9UBR1 384 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 MOKQ9UQ07 419 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 TRAPPC4Q9Y296 219 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 STAMBPO95630 424 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 TFPIP10646 304 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 MPGP29372 298 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 PPOXP50336 477 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 CHN2P52757 468 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 SLC25A3Q00325 362 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 EFNB3Q15768 340 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 CARTPTQ16568 116 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 PDZK1Q5T2W1 519 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 SLC46A3Q7Z3Q1 461 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 SFXN5Q8TD22 340 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 OIT3Q8WWZ8 545 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 VRK1Q99986 396 aaPredicted RBP16.17■□□□□ 0.18
TPM1-226ENST00000560959 RAB1BQ9H0U4 201 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 CHRNA9Q9UGM1 479 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 METRNQ9UJH8 293 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 SLC9A8Q9Y2E8 581 aa16.17■□□□□ 0.18
TPM1-226ENST00000560959 DUXAA6NLW8 204 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 EIF1BO60739 113 aaKnown RBP16.16■□□□□ 0.18
TPM1-226ENST00000560959 AK1P00568 194 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 CSTAP01040 98 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 ABHD2P08910 425 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 EFNA1P20827 205 aaPredicted RBP16.16■□□□□ 0.18
TPM1-226ENST00000560959 IDH3GP51553 393 aaPredicted RBP16.16■□□□□ 0.18
TPM1-226ENST00000560959 TP53BP2Q13625 1128 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 LSM12Q3MHD2 195 aaKnown RBP16.16■□□□□ 0.18
TPM1-226ENST00000560959 AP1ARQ63HQ0 302 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 EIF3MQ7L2H7 374 aaKnown RBP16.16■□□□□ 0.18
TPM1-226ENST00000560959 CCDC103Q8IW40 242 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 OR2T11Q8NH01 316 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 CLHC1Q8NHS4 586 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 KATNB1Q9BVA0 655 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 PLK3Q9H4B4 646 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 SLC7A10Q9NS82 523 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 CA10Q9NS85 328 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 EMCNQ9ULC0 261 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 MEGF8Q7Z7M0 2845 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 TENM1Q9UKZ4 2725 aa16.16■□□□□ 0.18
TPM1-226ENST00000560959 LRP5LA4QPB2 252 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 LSM1O15116 133 aaKnown RBP16.15■□□□□ 0.18
TPM1-226ENST00000560959 SCAMP2O15127 329 aaKnown RBP16.15■□□□□ 0.18
TPM1-226ENST00000560959 LILRA1O75019 489 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 STX11O75558 287 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 SNUPNO95149 360 aaKnown RBP16.15■□□□□ 0.18
TPM1-226ENST00000560959 BCKDHAP12694 445 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 EGR1P18146 543 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 HPCAL1P37235 193 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 RPL38P63173 70 aaKnown RBP16.15■□□□□ 0.18
TPM1-226ENST00000560959 C3orf36Q3SXR2 165 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 KLHL24Q6TFL4 600 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 CASP12Q6UXS9 341 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 ANKS4BQ8N8V4 417 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 NEU4Q8WWR8 484 aaPredicted RBP16.15■□□□□ 0.18
TPM1-226ENST00000560959 ARL5BQ96KC2 179 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 OR7D2Q96RA2 312 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 ATAD3AQ9NVI7 634 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 TMEM181Q9P2C4 612 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 KCNE5Q9UJ90 142 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 FLVCR1Q9Y5Y0 555 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 PTGDR2Q9Y5Y4 395 aa16.15■□□□□ 0.18
TPM1-226ENST00000560959 TMEM114B3SHH9 223 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 UGT2B17O75795 530 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 CYP7B1O75881 506 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 GUSBP08236 651 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 LAMP1P11279 417 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 DVL1P1P54792 670 aaPredicted RBP16.14■□□□□ 0.17
TPM1-226ENST00000560959 CDH15P55291 814 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 CKAP4Q07065 602 aaKnown RBP16.14■□□□□ 0.17
TPM1-226ENST00000560959 FAM174BQ3ZCQ3 159 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 CCDC153Q494R4 210 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 SPDYE7PQ495Y7 208 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 TSPO2Q5TGU0 170 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 GRINAQ7Z429 371 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 FAM71CQ8NEG0 241 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 SEMA6DQ8NFY4 1073 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 OR7A2PQ8NGA2 310 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 SLC38A2Q96QD8 506 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 KCNS3Q9BQ31 491 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 TUBB1Q9H4B7 451 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 PIF1Q9H611 641 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 CTPS2Q9NRF8 586 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms