RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C17orf51A8MQB3 221 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 MCIDASD6RGH6 385 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 PRR23D1E9PI22 279 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 GTPBP1O00178 669 aaKnown RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 LRRTM2O43300 516 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 NDUFB2O95178 105 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 CER1O95813 267 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 IGF2P01344 180 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 PRR23D2P0DMB1 279 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 HPGDP15428 266 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 HK1P19367 917 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 PSMA1P25786 263 aaKnown RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 HOXD12P35452 270 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 PNLIPRP2P54317 469 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 RPS25P62851 125 aaKnown RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 DAB2P98082 770 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 ITGADQ13349 1161 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 TMED1Q13445 227 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 ELOA3BQ3SY89 546 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 B3GLCTQ6Y288 498 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 RTL4Q6ZR62 310 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 LHFPL3Q86UP9 236 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 KLHL36Q8N4N3 616 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 LRRC17Q8N6Y2 441 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM105Q8N8V8 129 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 C17orf47Q8NEP4 570 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 ELOA3Q8NG57 546 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 OR51G2Q8NGK0 314 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 OR52N1Q8NH53 320 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 NACC2Q96BF6 587 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 OTULINQ96BN8 352 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 MESP1Q9BRJ9 268 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 TMEM43Q9BTV4 400 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 ASPNQ9BXN1 380 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 SLC19A3Q9BZV2 496 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 SEMA4CQ9C0C4 833 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 APMAPQ9HDC9 416 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 OCIAD1Q9NX40 245 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 KMT2EQ8IZD2 1858 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 SPTBN5Q9NRC6 3674 aaKnown RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 SAGE2PA6NJ88 616 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 VSTM2BA6NLU5 285 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 C12orf71A8MTZ7 269 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 IDSB3KWA1 339 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ALG1L2C9J202 215 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF670-ZNF695F2Z2N8 137 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 NTN3O00634 580 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ALOX12BO75342 701 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 TSPAN19P0C672 248 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 CLUP10909 449 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 PNMTP11086 282 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 PEPDP12955 493 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF3P17036 446 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 PAICSP22234 425 aaKnown RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ABCD3P28288 659 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 RPS4XP62701 263 aaKnown RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ACSM1Q08AH1 577 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 INAQ16352 499 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 CLPPQ16740 277 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 GXYLT1Q4G148 440 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 TRIM61Q5EBN2 209 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 SLC23A3Q6PIS1 610 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 Q6ZNX1 250 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 MARCH3Q86UD3 253 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ZFP41Q8N8Y5 198 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 CYB561A3Q8NBI2 242 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 OR5M3Q8NGP4 307 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 SPRYD4Q8WW59 207 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 GATAD2BQ8WXI9 593 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 UFD1Q92890 307 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 PTP4A1Q93096 173 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ERMAPQ96PL5 475 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 GFM1Q96RP9 751 aaKnown RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 SECISBP2Q96T21 854 aaKnown RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 SPSB2Q99619 263 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 C12orf10Q9HB07 376 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 TXNL4BQ9NX01 149 aaKnown RBP10.51□□□□□ -0.73
RAB5C-208ENST00000551338 KLHL21Q9UJP4 597 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF337Q9Y3M9 751 aa10.51□□□□□ -0.73
RAB5C-208ENST00000551338 PNMA8CA0A1B0GUJ8 204 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 HTR3EA5X5Y0 456 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 SLC22A31A6NKX4 558 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 D6RAR5 112 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 PLD2O14939 933 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 FADS1O60427 444 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 EIF4E2O60573 245 aaKnown RBP10.5□□□□□ -0.73
RAB5C-208ENST00000551338 IFNGP01579 166 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 HEXBP07686 556 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 FGF5P12034 268 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 TACR3P29371 465 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 SLC6A8P48029 635 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 RNF4P78317 190 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 DCDP81605 110 aaKnown RBP10.5□□□□□ -0.73
RAB5C-208ENST00000551338 EGR4Q05215 589 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 LTBQ06643 244 aa10.5□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF74Q16587 644 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms