RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 PRSS50Q9UI38 385 aa7.47□□□□□ -1.21
TROAP-208ENST00000548817 B3GALT5Q9Y2C3 310 aa7.47□□□□□ -1.21
TROAP-208ENST00000548817 NOSIPQ9Y314 301 aaKnown RBP7.47□□□□□ -1.21
TROAP-208ENST00000548817 TRAF6Q9Y4K3 522 aa7.47□□□□□ -1.21
TROAP-208ENST00000548817 PMF1-BGLAPU3KQ54 211 aa7.47□□□□□ -1.21
TROAP-208ENST00000548817 OR5H1A6NKK0 313 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 SHISA9B4DS77 424 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ANKRD28O15084 1053 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 LSM1O15116 133 aaKnown RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 TMPRSS2O15393 492 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 OIP5O43482 229 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PEX11AO75192 247 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 MRPL33O75394 65 aaKnown RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 STX11O75558 287 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 RAD51DO75771 328 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 C6orf47O95873 294 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 AK1P00568 194 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 CSTAP01040 98 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 LAMP1P11279 417 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 KRT4P19013 534 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PTNP21246 168 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 FKBP2P26885 142 aaKnown RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 TTKP33981 857 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 DIO1P49895 249 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ZNF83P51522 516 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 VSNL1P62760 191 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 GPR68Q15743 365 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 NDUFAF6Q330K2 333 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 SLC25A53Q5H9E4 307 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PDZK1Q5T2W1 519 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ATAD3BQ5T9A4 648 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 FBXW9Q5XUX1 488 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 KANK2Q63ZY3 851 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 OR7E24Q6IFN5 339 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 TREML4Q6UXN2 200 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 TMPPEQ6ZT21 453 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 C16orf62Q7Z3J2 963 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ATG4DQ86TL0 474 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 MTDHQ86UE4 582 aaKnown RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 C10orf107Q8IVU9 208 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 MUC15Q8N387 334 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ZNF525Q8N782 197 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ZNF433Q8N7K0 673 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 ZNF563Q8TA94 476 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PIGXQ8TBF5 258 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 MZB1Q8WU39 189 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 TWIST2Q8WVJ9 160 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 UBLCP1Q8WVY7 318 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 OR7D2Q96RA2 312 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 KLHDC3Q9BQ90 382 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 RBM4Q9BWF3 364 aaKnown RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 GATA5Q9BWX5 397 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 BHLHE41Q9C0J9 482 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 NMUR2Q9GZQ4 415 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 FKRPQ9H9S5 495 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 SIRT3Q9NTG7 399 aaPredicted RBP7.46□□□□□ -1.22
TROAP-208ENST00000548817 EXD2Q9NVH0 621 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PARPBPQ9NWS1 579 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ASB6Q9NWX5 421 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PRDM4Q9UKN5 801 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 PCDHGB4Q9UN71 923 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 DNAJC15Q9Y5T4 150 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 ATP23Q9Y6H3 246 aa7.46□□□□□ -1.22
TROAP-208ENST00000548817 H7C417 338 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 M0R1B8 84 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 PIP5K1BO14986 540 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 SMAD9O15198 467 aaKnown RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 NPHS1O60500 1241 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 VENTXO95231 258 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 PGM3O95394 542 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 AGR2O95994 175 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 TGFAP01135 160 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 FGF4P08620 206 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 FAM153BP0C7A2 387 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 APEHP13798 732 aaKnown RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 PRPS1L1P21108 318 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 MATN1P21941 496 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 PCMT1P22061 227 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 IGHV1-2P23083 117 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 APOBEC1P41238 236 aaKnown RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 MAGEA8P43361 318 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 LIMS1P48059 325 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 SESN3P58005 492 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 IRX1P78414 480 aaPredicted RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 TGFBR3Q03167 851 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 MAD2L1Q13257 205 aaPredicted RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 PDK3Q15120 406 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 OCLNQ16625 522 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 PGS1Q32NB8 556 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 FAM153CQ494X1 144 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 SYT14P1Q58G82 188 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 EXOSC6Q5RKV6 272 aaKnown RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
TROAP-208ENST00000548817 IL23RQ5VWK5 629 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 ZNF544Q6NX49 715 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 KLHL24Q6TFL4 600 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 DEF8Q6ZN54 512 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 C6orf120Q7Z4R8 191 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 C4orf33Q8N1A6 199 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms