RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 FKBP2P26885 142 aaKnown RBP19.88■□□□□ 0.77
CDKN3-207ENST00000543789 NTF4P34130 210 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 CASP9P55211 416 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 PGS1Q32NB8 556 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 ZNF544Q6NX49 715 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 B3GLCTQ6Y288 498 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 OLIG3Q7RTU3 272 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 ZNF563Q8TA94 476 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 PIGXQ8TBF5 258 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 MECRQ9BV79 373 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 CCDC106Q9BWC9 280 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 ZNF350Q9GZX5 532 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 CTPS2Q9NRF8 586 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 EXD2Q9NVH0 621 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 LPAR3Q9UBY5 353 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 CHRNA9Q9UGM1 479 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 HDGFL3Q9Y3E1 203 aa19.88■□□□□ 0.77
CDKN3-207ENST00000543789 F12P00748 615 aaPredicted RBP19.87■□□□□ 0.77
CDKN3-207ENST00000543789 BMP4P12644 408 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 PGM1P36871 562 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 GABRA6Q16445 453 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 C16orf62Q7Z3J2 963 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 CLEC4FQ8N1N0 589 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 KIF18AQ8NI77 898 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 PROX1Q92786 737 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 APOPT1Q96IL0 206 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 ARL5BQ96KC2 179 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 C1QTNF6Q9BXI9 259 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 MANSC1Q9H8J5 431 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 MALT1Q9UDY8 824 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 SLC35A3Q9Y2D2 325 aa19.87■□□□□ 0.77
CDKN3-207ENST00000543789 DNPH1O43598 174 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 G6PDP11413 515 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 CLK1P49759 484 aaKnown RBP19.86■□□□□ 0.77
CDKN3-207ENST00000543789 SLC16A1P53985 500 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 MAPK14Q16539 360 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 CCDC103Q8IW40 242 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 EIF1ADQ8N9N8 165 aaKnown RBP19.86■□□□□ 0.77
CDKN3-207ENST00000543789 FAM71CQ8NEG0 241 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 C10orf105Q8TEF2 133 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 OIT3Q8WWZ8 545 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 TUBGCP3Q96CW5 907 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 DNAJA3Q96EY1 480 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 SLC35G5Q96KT7 338 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 MKS1Q9NXB0 559 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 ZDHHC2Q9UIJ5 367 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 ATP23Q9Y6H3 246 aa19.86■□□□□ 0.77
CDKN3-207ENST00000543789 RNF103-CHMP3A0A140T963 221 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 GUSBP08236 651 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 CSF3P09919 207 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 RYKP34925 604 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 MAGEA8P43361 318 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 EFNA4P52798 201 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 FOXG1P55316 489 aaPredicted RBP19.85■□□□□ 0.77
CDKN3-207ENST00000543789 CLDN8P56748 225 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 OR2B6P58173 313 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 CHRNB3Q05901 458 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 ATAD3BQ5T9A4 648 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 ZCCHC23Q6ZST2 131 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 GRINAQ7Z429 371 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 ADGRG3Q86Y34 549 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 CLECL1Q8IZS7 167 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 WDR31Q8NA23 367 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 MIPOL1Q8TD10 442 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 XAGE5Q8WWM1 108 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 SHARPINQ9H0F6 387 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 OR51I1Q9H343 314 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 FKRPQ9H9S5 495 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 PCDHGB4Q9UN71 923 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 PMF1-BGLAPU3KQ54 211 aa19.85■□□□□ 0.77
CDKN3-207ENST00000543789 TLDC2A0PJX2 215 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 KIAA0513O60268 411 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 BCAS1O75363 584 aaPredicted RBP19.84■□□□□ 0.77
CDKN3-207ENST00000543789 SKAP2O75563 359 aaPredicted RBP19.84■□□□□ 0.77
CDKN3-207ENST00000543789 AGR2O95994 175 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 ITGA5P08648 1049 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 OR12D1P0DN82 309 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 IGHV4-31P0DP07 118 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 USF1P22415 310 aaPredicted RBP19.84■□□□□ 0.77
CDKN3-207ENST00000543789 SERPINB5P36952 375 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 MAD2L1Q13257 205 aaPredicted RBP19.84■□□□□ 0.77
CDKN3-207ENST00000543789 OR4F3Q6IEY1 312 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 OR52E4Q8NGH9 312 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 OR11A1Q9GZK7 315 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 POLE3Q9NRF9 147 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 PARPBPQ9NWS1 579 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 TMEM181Q9P2C4 612 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 SLC17A7Q9P2U7 560 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 UPB1Q9UBR1 384 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 TRAPPC4Q9Y296 219 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 WDR45Q9Y484 360 aa19.84■□□□□ 0.77
CDKN3-207ENST00000543789 PDLIM1O00151 329 aa19.83■□□□□ 0.77
CDKN3-207ENST00000543789 RNASET2O00584 256 aaKnown RBP19.83■□□□□ 0.77
CDKN3-207ENST00000543789 APOBEC3AP31941 199 aaPredicted RBP19.83■□□□□ 0.77
CDKN3-207ENST00000543789 ARRB2P32121 409 aa19.83■□□□□ 0.77
CDKN3-207ENST00000543789 LSM11P83369 360 aaKnown RBP eCLIP19.83■□□□□ 0.77
CDKN3-207ENST00000543789 H3F3AP84243 136 aa19.83■□□□□ 0.77
CDKN3-207ENST00000543789 EMX2Q04743 252 aa19.83■□□□□ 0.77
CDKN3-207ENST00000543789 AP1ARQ63HQ0 302 aa19.83■□□□□ 0.77
CDKN3-207ENST00000543789 TYW3Q6IPR3 259 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms