RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 DCTDP32321 178 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR1D2P34982 312 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RORAP35398 523 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ATP6V1E1P36543 226 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 GDI2P50395 445 aaKnown RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RAB13P51153 203 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 POLR2GP62487 172 aaKnown RBP eCLIP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RPS15P62841 145 aaKnown RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ACTC1P68032 377 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ACTA1P68133 377 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CBFBQ13951 182 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SERTAD2Q14140 314 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 GGTLC2Q14390 218 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CEBPEQ15744 281 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 KCNA10Q16322 511 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 LY6G6FQ5SQ64 297 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 THSD4Q6ZMP0 1018 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 WDR88Q6ZMY6 472 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ZNF793Q6ZN11 406 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 TMPRSS11FQ6ZWK6 438 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RAB11FIP2Q7L804 512 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 LINGO2Q7L985 606 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 TMEM17Q86X19 198 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 NRSN1Q8IZ57 195 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RNF113BQ8IZP6 322 aaKnown RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CRIPAKQ8N1N5 446 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RFLNBQ8N5W9 214 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ARL14EPQ8N8R7 260 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RELL2Q8NC24 303 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 VN1R2Q8NFZ6 395 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR10H4Q8NGA5 316 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR56A1Q8NGH5 318 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR52B4Q8NGK2 314 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR5M1Q8NGP8 315 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR2A12Q8NGT7 310 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 STK35Q8TDR2 534 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 FCAMRQ8WWV6 532 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 RAB40AQ8WXH6 277 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 PIGKQ92643 395 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 MOAP1Q96BY2 351 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 HAVCR1Q96D42 359 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SMIM19Q96E16 107 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 PELI1Q96FA3 418 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 IL17FQ96PD4 163 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 DERL3Q96Q80 235 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 PITHD1Q9GZP4 211 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ALX4Q9H161 411 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 WDR13Q9H1Z4 485 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ZDHHC6Q9H6R6 413 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 BIN3Q9NQY0 253 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SIDT1Q9NXL6 827 aaKnown RBP6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SPG21Q9NZD8 308 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CALML5Q9NZT1 146 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 KLK11Q9UBX7 282 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 ZNF69Q9UC07 566 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 OR5V1Q9UGF6 321 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CES1P1Q9UKY3 287 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 CLEC4AQ9UMR7 237 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SIGLEC7Q9Y286 467 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 SLC35A3Q9Y2D2 325 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 PLEKHM1Q9Y4G2 1056 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 BPTFQ12830 3046 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 KIAA1549LQ6ZVL6 1849 aa6.39□□□□□ -1.39
CPSF7-215ENST00000536145 FXYD6-FXYD2A0A087WZ82 144 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 ARPC4-TTLL3A0A0A6YYG9 625 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 C17orf113A0A1B0GUU1 675 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 A0A1B0GW55 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 TMEM218A2RU14 115 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 TRAPPC13A5PLN9 417 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 RNF222A6NCQ9 220 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 CHURC1-FNTBB4DL54 471 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 PRR23D1E9PI22 279 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-215ENST00000536145 H7C417 338 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 ACOT7O00154 380 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 SPINT1O43278 529 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 FGF16O43320 207 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 EMC8O43402 210 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 GPRIN2O60269 458 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 KHDRBS3O75525 346 aaKnown RBP6.38□□□□□ -1.39
CPSF7-215ENST00000536145 CLEC3AO75596 197 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 ATG12O94817 140 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 RASGRP1O95267 797 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 SNAPINO95295 136 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 CD8AP01732 235 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 HMGN2P05204 90 aaKnown RBP6.38□□□□□ -1.39
CPSF7-215ENST00000536145 CKMP06732 381 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L2P0CJ85 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L3P0CJ86 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L4P0CJ87 422 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L5P0CJ88 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L6P0CJ89 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 DUX4L7P0CJ90 424 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 PRR23D2P0DMB1 279 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-215ENST00000536145 SLC25A4P12235 298 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 CKBP12277 381 aa6.38□□□□□ -1.39
CPSF7-215ENST00000536145 ADCYAP1P18509 176 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms