RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 NTF4P34130 210 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 FOXG1P55316 489 aaPredicted RBP21.05■□□□□ 0.96
USP47-205ENST00000525257 PGS1Q32NB8 556 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 ZCCHC23Q6ZST2 131 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 EIF3MQ7L2H7 374 aaKnown RBP21.05■□□□□ 0.96
USP47-205ENST00000525257 RIMKLAQ8IXN7 391 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 DEPDC4Q8N2C3 294 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 SLC35G5Q96KT7 338 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 PPCSQ9HAB8 311 aa21.05■□□□□ 0.96
USP47-205ENST00000525257 SPIN1Q9Y657 262 aaPredicted RBP21.05■□□□□ 0.96
USP47-205ENST00000525257 RNF103-CHMP3A0A140T963 221 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 DUXAA6NLW8 204 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 H7C417 338 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 BCAS1O75363 584 aaPredicted RBP21.04■□□□□ 0.96
USP47-205ENST00000525257 GABRA6Q16445 453 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 MAPK14Q16539 360 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 ARHGAP11BQ3KRB8 267 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 C16orf62Q7Z3J2 963 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 CLECL1Q8IZS7 167 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 ZNF563Q8TA94 476 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 PIGXQ8TBF5 258 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 C10orf105Q8TEF2 133 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 APOPT1Q96IL0 206 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 ARL5BQ96KC2 179 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 INPP5KQ9BT40 448 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 CCDC106Q9BWC9 280 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 ZNF350Q9GZX5 532 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 MALT1Q9UDY8 824 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 CHRNA9Q9UGM1 479 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 ATP23Q9Y6H3 246 aa21.04■□□□□ 0.96
USP47-205ENST00000525257 GPR171O14626 319 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 MRPL33O75394 65 aaKnown RBP21.03■□□□□ 0.96
USP47-205ENST00000525257 F12P00748 615 aaPredicted RBP21.03■□□□□ 0.96
USP47-205ENST00000525257 ITGA5P08648 1049 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 RYKP34925 604 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 APOBEC1P41238 236 aaKnown RBP21.03■□□□□ 0.96
USP47-205ENST00000525257 KRTAP24-1Q3LI83 254 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 C9orf135Q5VTT2 229 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 CYB5R2Q6BCY4 276 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 ZNF544Q6NX49 715 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 LSRQ86X29 649 aaPredicted RBP21.03■□□□□ 0.96
USP47-205ENST00000525257 CCDC103Q8IW40 242 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 OR52E4Q8NGH9 312 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 OR11A1Q9GZK7 315 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 TMEM160Q9NX00 188 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 SLC17A7Q9P2U7 560 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 LPAR3Q9UBY5 353 aa21.03■□□□□ 0.96
USP47-205ENST00000525257 HEATR1Q9H583 2144 aaKnown RBP21.02■□□□□ 0.96
USP47-205ENST00000525257 LY6HO94772 140 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 PMS2P2O95744 297 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 IGHV4-31P0DP07 118 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 G6PDP11413 515 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 ARRB2P32121 409 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 PGM1P36871 562 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 OR4F3Q6IEY1 312 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 OR7E24Q6IFN5 339 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 CASP12Q6UXS9 341 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 FAM71CQ8NEG0 241 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 TUBGCP3Q96CW5 907 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 MUS81Q96NY9 551 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 SHARPINQ9H0F6 387 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 OR51I1Q9H343 314 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 EXD2Q9NVH0 621 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 MKS1Q9NXB0 559 aa21.02■□□□□ 0.96
USP47-205ENST00000525257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.02■□□□□ 0.962e-6■■□□□ 14.1
USP47-205ENST00000525257 KIAA0513O60268 411 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 CCNA2P20248 432 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 SLC16A1P53985 500 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 OR2B6P58173 313 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 HMGN2P46Q86SG4 172 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 ARIH2OSQ8N7S6 290 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 WDR31Q8NA23 367 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 ZDHHC2Q9UIJ5 367 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 SLC35A3Q9Y2D2 325 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 HDGFL3Q9Y3E1 203 aa21.01■□□□□ 0.95
USP47-205ENST00000525257 TLDC2A0PJX2 215 aa21■□□□□ 0.95
USP47-205ENST00000525257 ANKRD28O15084 1053 aa21■□□□□ 0.95
USP47-205ENST00000525257 OR12D1P0DN82 309 aa21■□□□□ 0.95
USP47-205ENST00000525257 USF1P22415 310 aaPredicted RBP21■□□□□ 0.95
USP47-205ENST00000525257 MAGEA8P43361 318 aa21■□□□□ 0.95
USP47-205ENST00000525257 EFNA4P52798 201 aa21■□□□□ 0.95
USP47-205ENST00000525257 SLC25A3Q00325 362 aa21■□□□□ 0.95
USP47-205ENST00000525257 CHRNB3Q05901 458 aa21■□□□□ 0.95
USP47-205ENST00000525257 TYW3Q6IPR3 259 aaKnown RBP21■□□□□ 0.95
USP47-205ENST00000525257 GRINAQ7Z429 371 aa21■□□□□ 0.95
USP47-205ENST00000525257 OR4A15Q8NGL6 344 aa21■□□□□ 0.95
USP47-205ENST00000525257 PROX1Q92786 737 aa21■□□□□ 0.95
USP47-205ENST00000525257 RAB8BQ92930 207 aa21■□□□□ 0.95
USP47-205ENST00000525257 AMBRA1Q9C0C7 1298 aa21■□□□□ 0.95
USP47-205ENST00000525257 FKRPQ9H9S5 495 aa21■□□□□ 0.95
USP47-205ENST00000525257 WDR45Q9Y484 360 aa21■□□□□ 0.95
USP47-205ENST00000525257 MALRD1Q5VYJ5 2156 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 DNPH1O43598 174 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 CSF3P09919 207 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 BMP4P12644 408 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 ATAD3BQ5T9A4 648 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 TNFAIP8L2Q6P589 184 aaPredicted RBP20.99■□□□□ 0.95
USP47-205ENST00000525257 EMBQ6PCB8 327 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 ADGRG3Q86Y34 549 aa20.99■□□□□ 0.95
USP47-205ENST00000525257 KIF18AQ8NI77 898 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms