RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 XAGE5Q8WWM1 108 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 TMEM234Q8WY98 164 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 APH1AQ96BI3 265 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 PKNOX2Q96KN3 472 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 RHNO1Q9BSD3 238 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 ZNF350Q9GZX5 532 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 ZNF716A6NP11 495 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 KIAA0513O60268 411 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 LY6HO94772 140 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 PGM3O95394 542 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 CD40P25942 277 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 TTKP33981 857 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 PGM1P36871 562 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 FABP6P51161 128 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 OR2B6P58173 313 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 FUT5Q11128 374 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 CHRFAM7AQ494W8 412 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 C6orf52Q5T4I8 152 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 FBXW9Q5XUX1 488 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 TYW3Q6IPR3 259 aaKnown RBP11.12□□□□□ -0.63
SKA1-205ENST00000494518 C11orf71Q6IPW1 123 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 BHLHB9Q6PI77 547 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 MTDHQ86UE4 582 aaKnown RBP11.12□□□□□ -0.63
SKA1-205ENST00000494518 FBXL14Q8N1E6 418 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 NATD1Q8N6N6 113 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 ZG16BQ96DA0 208 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 ADAD1Q96M93 576 aaKnown RBP11.12□□□□□ -0.63
SKA1-205ENST00000494518 CCDC106Q9BWC9 280 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 CBLN4Q9NTU7 201 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 WDR45Q9Y484 360 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 SLC25A15Q9Y619 301 aa11.12□□□□□ -0.63
SKA1-205ENST00000494518 ANK2Q01484 3957 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 A0A096LNT2 108 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 DUXAA6NLW8 204 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 AP3D1O14617 1153 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 ITM2AO43736 263 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 DNAJA2O60884 412 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 AK1P00568 194 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 IFNA2P01563 188 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 BPGMP07738 259 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 ITGA5P08648 1049 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 DHRS4L1P0CG22 281 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 CLDN8P56748 225 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 PLAURQ03405 335 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 NRF1Q16656 503 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 TMEM249Q2WGJ8 235 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 GPAT3Q53EU6 434 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 EMBQ6PCB8 327 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 KLHL17Q6TDP4 642 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 CASP12Q6UXS9 341 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 FRRS1Q6ZNA5 592 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 P2RY8Q86VZ1 359 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 MUC15Q8N387 334 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 FAM71CQ8NEG0 241 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 SLC25A43Q8WUT9 341 aaPredicted RBP11.11□□□□□ -0.63
SKA1-205ENST00000494518 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 DHRS9Q9BPW9 319 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 EXD2Q9NVH0 621 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 ASB6Q9NWX5 421 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 NOP53Q9NZM5 478 aaKnown RBP11.11□□□□□ -0.63
SKA1-205ENST00000494518 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
SKA1-205ENST00000494518 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
SKA1-205ENST00000494518 PRAMEF27A3QJZ7 478 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 PMS2P2O95744 297 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 ZNF16P17020 682 aaPredicted RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 PHC1P78364 1004 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 SLC25A3Q00325 362 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 EMX2Q04743 252 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 RAB35Q15286 201 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 GABRA6Q16445 453 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 ATAD3BQ5T9A4 648 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 ADGRG3Q86Y34 549 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 ZNF781Q8N8C0 355 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 OR10H5Q8NGA6 315 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 CNOT9Q92600 299 aaKnown RBP11.1□□□□□ -0.63
SKA1-205ENST00000494518 ZBTB9Q96C00 473 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 ROPN1LQ96C74 230 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 RADILQ96JH8 1075 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 DPY30Q9C005 99 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 GRIP2Q9C0E4 1043 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 AKTIPQ9H8T0 292 aa11.1□□□□□ -0.63
SKA1-205ENST00000494518 TAS2R16Q9NYV7 291 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms