RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SYPL1Q16563 259 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 CLEC12BQ2HXU8 276 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 KRT71Q3SY84 523 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 FAM174BQ3ZCQ3 159 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 SYT14P1Q58G82 188 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 COX20Q5RI15 118 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 FBXW9Q5XUX1 488 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 ABLIM2Q6H8Q1 611 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 OGFOD2Q6N063 350 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 C3orf33Q6P1S2 294 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 EIF3MQ7L2H7 374 aaKnown RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 GALNT5Q7Z7M9 940 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 RNF130Q86XS8 419 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 TRIM44Q96DX7 344 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 SLC35G5Q96KT7 338 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 CCDC115Q96NT0 180 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 SLC35A5Q9BS91 424 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 TACO1Q9BSH4 297 aaKnown RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 RSPO3Q9BXY4 272 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 POTEKPQ9BYX7 375 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 DPY30Q9C005 99 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 ESRP2Q9H6T0 727 aaKnown RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 MEAF6Q9HAF1 191 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 FANCFQ9NPI8 374 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 CHRNA9Q9UGM1 479 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 GDF2Q9UK05 429 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 PCDHGB4Q9UN71 923 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 WDR45Q9Y484 360 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 CHST2Q9Y4C5 530 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 GPR45Q9Y5Y3 372 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 ARID1AO14497 2285 aa6.19□□□□□ -1.42
HDAC3-207ENST00000475549 RAI1Q7Z5J4 1906 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-207ENST00000475549 TMEM72A0PK05 275 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ZC3H12DA2A288 527 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 OR5H1A6NKK0 313 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 E7EQL1 145 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 E9PBE3 544 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TM9SF1O15321 606 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 RGS16O15492 202 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GPRIN2O60269 458 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 CRLF1O75462 422 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 RAD51DO75771 328 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 PMS2P2O95744 297 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GSNP06396 782 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ITGA5P08648 1049 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TFPIP10646 304 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 IMPDH2P12268 514 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 LBPP18428 481 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GGT1P19440 569 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 PGCP20142 388 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 CCNA2P20248 432 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 IDH2P48735 452 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SLC16A1P53985 500 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 PRSS12P56730 875 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SPOCK1Q08629 439 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 FAPQ12884 760 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 STX3Q13277 289 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 PPA1Q15181 289 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 STK11Q15831 433 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GABRA6Q16445 453 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TIMM23BQ5SRD1 257 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ANXA8L1Q5VT79 327 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 DMRTA1Q5VZB9 504 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 C16orf62Q7Z3J2 963 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GRINAQ7Z429 371 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 MAVSQ7Z434 540 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 DTX2Q86UW9 622 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF100Q8IYN0 542 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ZIC4Q8N9L1 334 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 WDR31Q8NA23 367 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 OR52E4Q8NGH9 312 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TMEM234Q8WY98 164 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 FBXW5Q969U6 566 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 MUS81Q96NY9 551 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TRNT1Q96Q11 434 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 USB1Q9BQ65 265 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 TRAF4Q9BUZ4 470 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 C1QTNF6Q9BXI9 259 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 REG4Q9BYZ8 158 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 GRIP2Q9C0E4 1043 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SLC38A1Q9H2H9 487 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SLCO5A1Q9H2Y9 848 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 WDR55Q9H6Y2 383 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 EXOSC3Q9NQT5 275 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 POLE3Q9NRF9 147 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SERINC1Q9NRX5 453 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 EXD2Q9NVH0 621 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 AIG1Q9NVV5 245 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 RLIMQ9NVW2 624 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 CISD1Q9NZ45 108 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 MARCOQ9UEW3 520 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 BTNL2Q9UIR0 455 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 OSGIN1Q9UJX0 560 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 B3GALT5Q9Y2C3 310 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SLC35A3Q9Y2D2 325 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 SLC25A15Q9Y619 301 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms