RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 IGHV3-9P01782 118 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 IGHV4-39P01824 125 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 IL12AP29459 219 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 RYKP34925 604 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 RPL14P50914 215 aaKnown RBP19.69■□□□□ 0.74
HMG20B-205ENST00000435022 CHRNEQ04844 493 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 PPA1Q15181 289 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 CLEC12BQ2HXU8 276 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 TTMPQ5BVD1 217 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 DNM1P46Q6ZS02 220 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 ADGRG3Q86Y34 549 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 KIRREL3Q8IZU9 778 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 ZNF433Q8N7K0 673 aaPredicted RBP19.69■□□□□ 0.74
HMG20B-205ENST00000435022 TMEM234Q8WY98 164 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 CNOT9Q92600 299 aaKnown RBP19.69■□□□□ 0.74
HMG20B-205ENST00000435022 ATP6V1G3Q96LB4 118 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 POLE3Q9NRF9 147 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 CHRNA9Q9UGM1 479 aa19.69■□□□□ 0.74
HMG20B-205ENST00000435022 ANK3Q12955 4377 aaKnown RBP19.68■□□□□ 0.74
HMG20B-205ENST00000435022 GOLGA8QA0A0J9YX86 632 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 GOLGA8OA6NCC3 632 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 RNF223E7ERA6 249 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 GOLGA8NF8WBI6 632 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 AP3D1O14617 1153 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 ACVR1BP36896 505 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 CDKN2CP42773 168 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 FAPQ12884 760 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 FAM174BQ3ZCQ3 159 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 GALNT5Q7Z7M9 940 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 MTDHQ86UE4 582 aaKnown RBP19.68■□□□□ 0.74
HMG20B-205ENST00000435022 ANKFN1Q8N957 763 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SLC25A43Q8WUT9 341 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-205ENST00000435022 CCDC115Q96NT0 180 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SLC35A5Q9BS91 424 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 TRAF4Q9BUZ4 470 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SLC38A1Q9H2H9 487 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SLCO5A1Q9H2Y9 848 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 VIPAS39Q9H9C1 493 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 MEAF6Q9HAF1 191 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 NGBQ9NPG2 151 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SERINC1Q9NRX5 453 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 GDF2Q9UK05 429 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-205ENST00000435022 PCDHGB4Q9UN71 923 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SLC35A3Q9Y2D2 325 aa19.68■□□□□ 0.74
HMG20B-205ENST00000435022 SONP18583 2426 aaKnown RBP19.67■□□□□ 0.74
HMG20B-205ENST00000435022 E9PBE3 544 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 CHRM4P08173 479 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 LBPP18428 481 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 PTNP21246 168 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 APOBEC1P41238 236 aaKnown RBP19.67■□□□□ 0.74
HMG20B-205ENST00000435022 KHKP50053 298 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 NME5P56597 212 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 UFM1P61960 85 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 SPOCK1Q08629 439 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 VEZF1Q14119 521 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 PDK3Q15120 406 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 SYPL1Q16563 259 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 TIMM23BQ5SRD1 257 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 ANXA8L1Q5VT79 327 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 OGFOD2Q6N063 350 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 DTX2Q86UW9 622 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 CCDC103Q8IW40 242 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 OIT3Q8WWZ8 545 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 USB1Q9BQ65 265 aaKnown RBP19.67■□□□□ 0.74
HMG20B-205ENST00000435022 INPP5KQ9BT40 448 aa19.67■□□□□ 0.74
HMG20B-205ENST00000435022 EXOSC3Q9NQT5 275 aaKnown RBP19.67■□□□□ 0.74
HMG20B-205ENST00000435022 MARCOQ9UEW3 520 aaPredicted RBP19.67■□□□□ 0.74
HMG20B-205ENST00000435022 A0A1W2PP18 115 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 OR5H1A6NKK0 313 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 SDHDO14521 159 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 RAD51DO75771 328 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 PMS2P2O95744 297 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 AGR2O95994 175 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 TFPIP10646 304 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 GGT1P19440 569 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 CSNK2A1P68400 391 aaPredicted RBP19.66■□□□□ 0.74
HMG20B-205ENST00000435022 KCNJ10P78508 379 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 MAPK11Q15759 364 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 ATAD3BQ5T9A4 648 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 FBXW9Q5XUX1 488 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 GRINAQ7Z429 371 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 RNF130Q86XS8 419 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 ZNF100Q8IYN0 542 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 GOLGA6L1Q8N7Z2 621 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 ZNF563Q8TA94 476 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 AIG1Q9NVV5 245 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 BTNL2Q9UIR0 455 aa19.66■□□□□ 0.74
HMG20B-205ENST00000435022 FBN1P35555 2871 aaKnown RBP19.66■□□□□ 0.74
HMG20B-205ENST00000435022 A0A1W2PR80 420 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 ABCD4O14678 606 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 SNNO75324 88 aaPredicted RBP19.65■□□□□ 0.74
HMG20B-205ENST00000435022 IMPDH2P12268 514 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 CCNA2P20248 432 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 RPS4Y1P22090 263 aaKnown RBP19.65■□□□□ 0.74
HMG20B-205ENST00000435022 SLC16A1P53985 500 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 H3F3AP84243 136 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 GPAT3Q53EU6 434 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 COX20Q5RI15 118 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 ATG16L1Q676U5 607 aa19.65■□□□□ 0.74
HMG20B-205ENST00000435022 LRRC34Q8IZ02 419 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms