RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 A0A087WUJ7 227 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 RHPN2P1A8MT19 583 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 LMO7DNF2Z398 122 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 PLPP2O43688 288 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.4
THBS3-202ENST00000428962 MYL9P24844 172 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CD1CP29017 333 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 GFERP55789 205 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CAV3P56539 151 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 ACTA2P62736 377 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 ACTG2P63267 376 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
THBS3-202ENST00000428962 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 FCRLBQ6BAA4 426 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CNIH2Q6PI25 160 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CARFQ8N187 725 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 ARSGQ96EG1 525 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
THBS3-202ENST00000428962 ART5Q96L15 291 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 MRTO4Q9UKD2 239 aaKnown RBP12.58□□□□□ -0.4
THBS3-202ENST00000428962 ZNF337Q9Y3M9 751 aa12.58□□□□□ -0.4
THBS3-202ENST00000428962 IGHV5-51A0A0C4DH38 117 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 C17orf105B2RV13 164 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 IGF2P01344 180 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 CSF3P09919 207 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 PNMTP11086 282 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 HPGDP15428 266 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 ADH7P40394 386 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 FHL1Q13642 323 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
THBS3-202ENST00000428962 KLHL26Q53HC5 615 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 ARL9Q6T311 187 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 DPY19L2P2Q6ZN68 376 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 VASH1Q7L8A9 365 aaPredicted RBP12.57□□□□□ -0.4
THBS3-202ENST00000428962 TPRA1Q86W33 373 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 METTL27Q8N6F8 245 aaPredicted RBP12.57□□□□□ -0.4
THBS3-202ENST00000428962 OR52E2Q8NGJ4 325 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 OR5M3Q8NGP4 307 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
THBS3-202ENST00000428962 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 C4orf36Q96KX1 117 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 OR1F2PQ96R84 312 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 CNN2Q99439 309 aaKnown RBP12.57□□□□□ -0.4
THBS3-202ENST00000428962 TIMP4Q99727 224 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 PCDHGB7Q9Y5F8 929 aa12.57□□□□□ -0.4
THBS3-202ENST00000428962 C2orf92A0A1B0GVN3 265 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 SSX4O60224 188 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 HPGDSO60760 199 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 OR7A10O76100 309 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
THBS3-202ENST00000428962 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
THBS3-202ENST00000428962 RFX2P48378 723 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 PRPS1P60891 318 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 DAB2P98082 770 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 ZNF85Q03923 595 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 RIN1Q13671 783 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 GGTLC2Q14390 218 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 TAB1Q15750 504 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 ISXQ2M1V0 245 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 DEFB133Q30KQ1 61 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 HBMQ6B0K9 141 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 WBP2NLQ6ICG8 309 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 UBQLNLQ8IYU4 475 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 EFHD2Q96C19 240 aaPredicted RBP12.56□□□□□ -0.4
THBS3-202ENST00000428962 SLC46A1Q96NT5 459 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 RNF32Q9H0A6 362 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 EXOSC3Q9NQT5 275 aaKnown RBP12.56□□□□□ -0.4
THBS3-202ENST00000428962 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 CUTCQ9NTM9 273 aa12.56□□□□□ -0.4
THBS3-202ENST00000428962 ELOA3DA6NLF2 546 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 J3QLW9 94 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SCDO00767 359 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 GNB5O14775 395 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 IDH3BO43837 385 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 IL33O95760 270 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SERPINA3P01011 423 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 CLPSP04118 112 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 OR2T7P0C7T2 308 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 CLUP10909 449 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SLC2A2P11168 524 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 UBL4AP11441 157 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ZNF19P17023 458 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 RORAP35398 523 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 EVX1P49640 407 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ARL4DP49703 201 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 NXPH1P58417 271 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 UBXN2BQ14CS0 331 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms