RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ETF1P62495 437 aaKnown RBP13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 MERTKQ12866 999 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 EFNB3Q15768 340 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 NDUFAF6Q330K2 333 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 RFTN2Q52LD8 501 aaPredicted RBP13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 TMCO5AQ8N6Q1 288 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 ZNF317Q96PQ6 595 aaPredicted RBP13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 SDF2Q99470 211 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 CCDC106Q9BWC9 280 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 PIF1Q9H611 641 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 MOV10Q9HCE1 1003 aaKnown RBP13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 CHRNA9Q9UGM1 479 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 SLC9A8Q9Y2E8 581 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 TRAF6Q9Y4K3 522 aa13.59□□□□□ -0.23
RPUSD3-204ENST00000424438 DUXAA6NLW8 204 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 EIF1BO60739 113 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 GLRA3O75311 464 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 BCKDHAP12694 445 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 EGR1P18146 543 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 MPGP29372 298 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 ECHS1P30084 290 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 KHKP50053 298 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 CCR4P51679 360 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 MAP2K6P52564 334 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 LSM12Q3MHD2 195 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 PDLIM3Q53GG5 364 aaPredicted RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 CFAP157Q5JU67 520 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 OR2T11Q8NH01 316 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 MZB1Q8WU39 189 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 TMEM45BQ96B21 275 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 THUMPD3Q9BV44 507 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 BHLHE41Q9C0J9 482 aaPredicted RBP13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 PLK3Q9H4B4 646 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 ATAD3AQ9NVI7 634 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
RPUSD3-204ENST00000424438 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 AZIN1O14977 448 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 LYPLA1O75608 230 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 CSTAP01040 98 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 PROCP04070 461 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 ITGA2P17301 1181 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 SERPINF1P36955 418 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 CHN2P52757 468 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 FOXG1P55316 489 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 RPL38P63173 70 aaKnown RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC25A3Q00325 362 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 IQCCQ4KMZ1 466 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 EIF3MQ7L2H7 374 aaKnown RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 GRINAQ7Z429 371 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 ZNF614Q8N883 585 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 FAM169BQ8N8A8 192 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 LINC01356Q8N9X3 169 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 RFWD2Q8NHY2 731 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 FBXO17Q96EF6 278 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 OR7D2Q96RA2 312 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 ZNF350Q9GZX5 532 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 POLE3Q9NRF9 147 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC7A10Q9NS82 523 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 OXSMQ9NWU1 459 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 BAIAP2L1Q9UHR4 511 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 TMEFF2Q9UIK5 374 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 PYCARDQ9ULZ3 195 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC35A3Q9Y2D2 325 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 FLVCR1Q9Y5Y0 555 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 KCNE3Q9Y6H6 103 aa13.57□□□□□ -0.24
RPUSD3-204ENST00000424438 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 A0A1W2PR80 420 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 STX11O75558 287 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 STAMBPO95630 424 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 CHEK2O96017 543 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 MAPK1P28482 360 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 DVL1P1P54792 670 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 POU3F1Q03052 451 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 SCGB2A2Q13296 93 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 TP53BP2Q13625 1128 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 FAM174BQ3ZCQ3 159 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 CLEC6AQ6EIG7 209 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 KLHL24Q6TFL4 600 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC46A3Q7Z3Q1 461 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 ABHD12BQ7Z5M8 362 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 POMGNT2Q8NAT1 580 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 SEMA6DQ8NFY4 1073 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 OR52E4Q8NGH9 312 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 NEU4Q8WWR8 484 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 ARL5BQ96KC2 179 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 SAP130Q9H0E3 1048 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms