RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ATP6AP1LQ52LC2 224 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 IL23RQ5VWK5 629 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR7E24Q6IFN5 339 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 EIF3MQ7L2H7 374 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C4orf33Q8N1A6 199 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 LY6HO94772 140 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLU7O95391 586 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PMS2P2O95744 297 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CSF3P09919 207 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 APOBEC3AP31941 199 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 THBS2P35442 1172 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ARHGAP11BQ3KRB8 267 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C6orf136Q5SQH8 315 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C9orf135Q5VTT2 229 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 BHLHB9Q6PI77 547 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C6orf120Q7Z4R8 191 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CLEC4FQ8N1N0 589 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR52E4Q8NGH9 312 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZNF563Q8TA94 476 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PIGXQ8TBF5 258 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 AGR3Q8TD06 166 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ARL5BQ96KC2 179 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DUSP26Q9BV47 211 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CCDC106Q9BWC9 280 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SERHL2Q9H4I8 314 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 EML4Q9HC35 981 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CHRNA9Q9UGM1 479 aa12.5□□□□□ -0.41
HLA-DQB2-229ENST00000411527 HAX1O00165 279 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NPHS1O60500 1241 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 AK1P00568 194 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ITGA5P08648 1049 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SRD5A1P18405 259 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PRPS1L1P21108 318 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 IGFBP5P24593 272 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ALDH3A1P30838 453 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RYKP34925 604 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MAGEA8P43361 318 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GZMKP49863 264 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR2B6P58173 313 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MAPK14Q16539 360 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 XKR7Q5GH72 579 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 IL17RELQ6ZVW7 336 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C16orf62Q7Z3J2 963 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RIMKLAQ8IXN7 391 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FNDC5Q8NAU1 212 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C3orf30Q96M34 536 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RHOXF2Q9BQY4 288 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 UPB1Q9UBR1 384 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 KCNS2Q9ULS6 477 aa12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ANKRD28O15084 1053 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 BCAS1O75363 584 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CCNA2P20248 432 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PGM1P36871 562 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PDLIM4P50479 330 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC16A1P53985 500 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FAM120AOSQ5T036 256 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CASP12Q6UXS9 341 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ADGRG3Q86Y34 549 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CLECL1Q8IZS7 167 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 EPS8L3Q8TE67 593 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC35G5Q96KT7 338 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZNF350Q9GZX5 532 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR51I1Q9H343 314 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC17A5Q9NRA2 495 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 EXD2Q9NVH0 621 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 HDGFL3Q9Y3E1 203 aa12.48□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NBEAL1Q6ZS30 2694 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ATP6V1G2-DDX39BF2Z307 99 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PDLIM1O00151 329 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DNPH1O43598 174 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR12D1P0DN82 309 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FKBP2P26885 142 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CLK1P49759 484 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PHC1P78364 1004 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms