RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CLEC4FQ8N1N0 589 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 EPS8L3Q8TE67 593 aaKnown RBP18.54■□□□□ 0.56
CD47-202ENST00000361309 ZHX1-C8orf76Q96EF9 292 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 MUS81Q96NY9 551 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 DUSP26Q9BV47 211 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 BHLHE41Q9C0J9 482 aaPredicted RBP18.54■□□□□ 0.56
CD47-202ENST00000361309 CTPS2Q9NRF8 586 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 ATP23Q9Y6H3 246 aa18.54■□□□□ 0.56
CD47-202ENST00000361309 DUXAA6NLW8 204 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 NPHS1O60500 1241 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 MRPL33O75394 65 aaKnown RBP18.53■□□□□ 0.56
CD47-202ENST00000361309 AK1P00568 194 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 PRPS1L1P21108 318 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 ALDH3A1P30838 453 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 APOBEC1P41238 236 aaKnown RBP18.53■□□□□ 0.56
CD47-202ENST00000361309 ARHGAP11BQ3KRB8 267 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 C6orf136Q5SQH8 315 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 OR7E24Q6IFN5 339 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 EIF3MQ7L2H7 374 aaKnown RBP18.53■□□□□ 0.56
CD47-202ENST00000361309 C6orf120Q7Z4R8 191 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 RIMKLAQ8IXN7 391 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 ARIH2OSQ8N7S6 290 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 FNDC5Q8NAU1 212 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 PIGXQ8TBF5 258 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 PROX1Q92786 737 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 ARL5BQ96KC2 179 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 MECRQ9BV79 373 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 CCDC106Q9BWC9 280 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 AMBRA1Q9C0C7 1298 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 EML4Q9HC35 981 aaKnown RBP18.53■□□□□ 0.56
CD47-202ENST00000361309 MALT1Q9UDY8 824 aa18.53■□□□□ 0.56
CD47-202ENST00000361309 SPIN1Q9Y657 262 aaPredicted RBP18.53■□□□□ 0.56
CD47-202ENST00000361309 ANK2Q01484 3957 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 GPR171O14626 319 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 LMX1BO60663 402 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 BCAS1O75363 584 aaPredicted RBP18.52■□□□□ 0.56
CD47-202ENST00000361309 LY6HO94772 140 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 PMS2P2O95744 297 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 ITGA5P08648 1049 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 USF1P22415 310 aaPredicted RBP18.52■□□□□ 0.56
CD47-202ENST00000361309 PGM1P36871 562 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 EFNA4P52798 201 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 LSM11P83369 360 aaKnown RBP eCLIP18.52■□□□□ 0.56
CD47-202ENST00000361309 MAPK14Q16539 360 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 C9orf135Q5VTT2 229 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 CCDC103Q8IW40 242 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 WDR31Q8NA23 367 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 OR52E4Q8NGH9 312 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 ZNF563Q8TA94 476 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 UBLCP1Q8WVY7 318 aaPredicted RBP18.52■□□□□ 0.56
CD47-202ENST00000361309 SLC35G5Q96KT7 338 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 ZNF350Q9GZX5 532 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 CHRNA9Q9UGM1 479 aa18.52■□□□□ 0.56
CD47-202ENST00000361309 CSF3P09919 207 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 RYKP34925 604 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 SLC16A1P53985 500 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 CHRNB3Q05901 458 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 PGS1Q32NB8 556 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 C16orf62Q7Z3J2 963 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 CLECL1Q8IZS7 167 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 FAM71CQ8NEG0 241 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 OR11A1Q9GZK7 315 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 PPCSQ9HAB8 311 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 HDGFL3Q9Y3E1 203 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 PMF1-BGLAPU3KQ54 211 aa18.51■□□□□ 0.55
CD47-202ENST00000361309 RNF103-CHMP3A0A140T963 221 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 ANKRD28O15084 1053 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 SKAP2O75563 359 aaPredicted RBP18.5■□□□□ 0.55
CD47-202ENST00000361309 C8BP07358 591 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 BMP4P12644 408 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 OR2B6P58173 313 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 SRSF2Q01130 221 aaKnown RBP18.5■□□□□ 0.55
CD47-202ENST00000361309 CASP12Q6UXS9 341 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 ZCCHC23Q6ZST2 131 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 C19orf24Q9BVV8 132 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 OR51I1Q9H343 314 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 FKRPQ9H9S5 495 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 EXD2Q9NVH0 621 aa18.5■□□□□ 0.55
CD47-202ENST00000361309 PDLIM1O00151 329 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 DNPH1O43598 174 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 KIAA0513O60268 411 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 G6PDP11413 515 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 SRD5A1P18405 259 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 CCNA2P20248 432 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 IGFBP5P24593 272 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 APOBEC3AP31941 199 aaPredicted RBP18.49■□□□□ 0.55
CD47-202ENST00000361309 THBS2P35442 1172 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 MAGEA8P43361 318 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 GZMKP49863 264 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 SLC25A3Q00325 362 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 OR4F3Q6IEY1 312 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 IL17RELQ6ZVW7 336 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 GRINAQ7Z429 371 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 LSRQ86X29 649 aaPredicted RBP18.49■□□□□ 0.55
CD47-202ENST00000361309 ADGRG3Q86Y34 549 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 APOPT1Q96IL0 206 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 CHODLQ9H9P2 273 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 SLC17A5Q9NRA2 495 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 SLC17A7Q9P2U7 560 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 UPB1Q9UBR1 384 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms