RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ceacam19Q3TQ88 271 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sgk494Q5SYL1 278 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Uts2bQ765I1 113 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Stk17bQ8BG48 372 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 NagpaQ8BJ48 517 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Kcnmb1Q8CAE3 191 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 H1fntQ8CJI4 398 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r212Q8R268 357 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr307Q8VFN8 313 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rab31Q921E2 194 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Polr2hQ923G2 150 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Psg23Q9D2U0 471 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Psg21Q9DAV5 471 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Psmg2Q9EST4 264 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cacng3Q9JJV5 315 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tex13aA2AFS9 377 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm10271F6WY25 52 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1360K9J6X0 313 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 GifP52787 417 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 CrxosQ3UL53 246 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sqstm1Q64337 442 aaKnown RBP13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Kiss1Q6Y4S4 130 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1359Q7TQU5 313 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r201Q8R262 300 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tmprss11dQ8VHK8 417 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Etfrf1Q91V16 86 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cry2Q9R194 592 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp69A2A761 587 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Aadacl2B2RWD2 401 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm4950D3YUM8 205 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr893K7N678 312 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Usp2O88623 613 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Meig1Q61845 88 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rhox11Q810N8 206 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Znf750Q8BH05 703 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r66Q8K4I0 310 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sec14l4Q8R0F9 403 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ccdc71Q8VEG0 433 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tmem205Q91XE8 189 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 RhebQ921J2 184 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ppp6cQ9CQR6 305 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gde1Q9JL56 331 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 A0A286YDG0 184 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mettl11bB2RXM4 283 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm10376D3YXI8 184 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r16K7N775 303 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cst3P21460 140 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Fam171bQ14CH0 825 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp987Q32P14 633 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zp1Q62005 623 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr688Q6W049 321 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1474Q7TQQ8 314 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr285Q7TS17 319 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Txnl1Q8CDN6 289 aaKnown RBP13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr799Q8VGI7 311 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 AspnQ99MQ4 373 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Trappc6bQ9D289 158 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Kcnmb3E9Q7U0 239 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn2r60L7N2A1 853 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ephb6O08644 1014 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 LcatP16301 438 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ugt2b36Q3UEP4 530 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Grm5Q3UVX5 1203 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 BC100530Q497J0 97 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dvl2Q60838 736 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Defb14Q7TNV9 67 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cdca3Q99M54 266 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sytl3Q99N48 607 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Il36bQ9D6Z6 183 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mageh1Q9NWG9 218 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn2r91E9Q2U5 856 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gstp3F6RWR5 210 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn2r92L7N2A4 860 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 GhrhrP32082 423 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sstr4P49660 385 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Lrrc3P59034 257 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 PcnpQ6P8I4 178 aaKnown RBP13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Elac1Q8VEB6 362 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr998Q8VF76 314 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Frs3Q91WJ0 492 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Pcdhb20Q91XZ9 799 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r48Q9EQ52 302 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 TfecQ9WTW4 317 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cldn6Q9Z262 219 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Col5a2Q3U962 1497 aa13.16□□□□□ -0.3
Col3a1-201ENSMUST00000087883 H60cB1B213 197 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slc22a28B2RT89 552 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Amy2a1E9PV85 245 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Amy2P00688 508 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sbk3P0C5K0 361 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cox4i1P19783 169 aaKnown RBP13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hoxc5P32043 222 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 P58686 83 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Adamts19P59509 1210 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 NarflQ7TMW6 476 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Lair1Q8BG84 263 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slc35c1Q8BLX4 363 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1312Q8VF10 317 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr459Q924H8 314 aa13.15□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slc22a30Q96LX3 552 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms