RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ATRQ13535 2644 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 SHISA9B4DS77 424 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 SULT2B1O00204 365 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 RNASET2O00584 256 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ITM2AO43736 263 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 TYROBPO43914 113 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 KIAA0513O60268 411 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 BCAS1O75363 584 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 CD8AP01732 235 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 GGT1P19440 569 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 PGM1P36871 562 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 VSNL1P62760 191 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 TIMM23BQ5SRD1 257 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 TYW3Q6IPR3 259 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 EIF3MQ7L2H7 374 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF100Q8IYN0 542 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 FAM71CQ8NEG0 241 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 MIPOL1Q8TD10 442 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 TMEM234Q8WY98 164 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 PKNOX2Q96KN3 472 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ROPN1BQ9BZX4 212 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ROPN1Q9HAT0 212 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ACER3Q9NUN7 267 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 EXD2Q9NVH0 621 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 GDF2Q9UK05 429 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 FBN3Q75N90 2809 aa18.35■□□□□ 0.53
TRAPPC3-208ENST00000616074 ABCA1O95477 2261 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 ABCD4O14678 606 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 SCN2BO60939 215 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 PGM3O95394 542 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 OR12D1P0DN82 309 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 CDH11P55287 796 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 CSNK2A1P68400 391 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 FUT5Q11128 374 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 SMU1Q2TAY7 513 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 DNM1P46Q6ZS02 220 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 ANKRD46Q86W74 232 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 NUDCD3Q8IVD9 361 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF433Q8N7K0 673 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF781Q8N8C0 355 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 OR8J2Q8NGG1 315 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 SLC25A43Q8WUT9 341 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 MUCL1Q96DR8 90 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 DNAJA3Q96EY1 480 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 CCDC106Q9BWC9 280 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 ALG2Q9H553 416 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 AKTIPQ9H8T0 292 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 CTPS2Q9NRF8 586 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 RTTNQ86VV8 2226 aa18.34■□□□□ 0.53
TRAPPC3-208ENST00000616074 IGKV3D-15A0A087WSY6 115 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 ADAM11O75078 769 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 IGHV3-9P01782 118 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 PHC1P78364 1004 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 TNFAIP8L2Q6P589 184 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 HMGN2P46Q86SG4 172 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 MTDHQ86UE4 582 aaKnown RBP18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 DTX2Q86UW9 622 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZNF563Q8TA94 476 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 XAGE5Q8WWM1 108 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 RAB8BQ92930 207 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZIM3Q96PE6 472 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 EMC3Q9P0I2 261 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 PCDHGB4Q9UN71 923 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 SLC35A3Q9Y2D2 325 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 WDR45Q9Y484 360 aa18.33■□□□□ 0.52
TRAPPC3-208ENST00000616074 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 WDR91A4D1P6 747 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 OR5H1A6NKK0 313 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZNF716A6NP11 495 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 RAD51DO75771 328 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 CPSF4O95639 269 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 AGR2O95994 175 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 TFPIP10646 304 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 PTNP21246 168 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 UQCRC2P22695 453 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 RYKP34925 604 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 APOBEC1P41238 236 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 PLAURQ03405 335 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 PDK3Q15120 406 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 ATAD3BQ5T9A4 648 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 FBXW9Q5XUX1 488 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 FRRS1Q6ZNA5 592 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 CXXC5Q7LFL8 322 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 P2RY8Q86VZ1 359 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 LSRQ86X29 649 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 ROPN1LQ96C74 230 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZG16BQ96DA0 208 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 ARL5BQ96KC2 179 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 HS6ST2Q96MM7 605 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 DPY30Q9C005 99 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 GRIP2Q9C0E4 1043 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 SAP130Q9H0E3 1048 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 FAIMQ9NVQ4 179 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 CHRNA9Q9UGM1 479 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 NOSIPQ9Y314 301 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 SPIN1Q9Y657 262 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 PLCE1Q9P212 2302 aa18.32■□□□□ 0.52
TRAPPC3-208ENST00000616074 MXRA5Q9NR99 2828 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms