RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 LIMS1P48059 325 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 DIO1P49895 249 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 UBA52P62987 128 aaKnown RBP6.89□□□□□ -1.31
VAT1-207ENST00000589828 HSPB3Q12988 150 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 QPRTQ15274 297 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 EFNB3Q15768 340 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 UNC50Q53HI1 259 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 ZNF385BQ569K4 471 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SPIN4Q56A73 249 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 ANKRD26P1Q6NSI1 321 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 VHLLQ6RSH7 139 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 LRIG3Q6UXM1 1119 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 CCDC91Q7Z6B0 441 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 MTDHQ86UE4 582 aaKnown RBP6.89□□□□□ -1.31
VAT1-207ENST00000589828 CCDC103Q8IW40 242 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 TMEM151AQ8N4L1 468 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 MMGT1Q8N4V1 131 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 CDRT4Q8N9R6 151 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 CLDND2Q8NHS1 167 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 MRPL24Q96A35 216 aaKnown RBP6.89□□□□□ -1.31
VAT1-207ENST00000589828 CIDECQ96AQ7 238 aaPredicted RBP6.89□□□□□ -1.31
VAT1-207ENST00000589828 LRRC37BQ96QE4 947 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SLC6A7Q99884 636 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 C1QTNF5Q9BXJ0 243 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 C1QTNF3Q9BXJ4 246 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SHCBP1LQ9BZQ2 653 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SAP130Q9H0E3 1048 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 RACGAP1Q9H0H5 632 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 RAB1BQ9H0U4 201 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 NARFLQ9H6Q4 476 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SEC61A2Q9H9S3 476 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 SIRT5Q9NXA8 310 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 GRHL1Q9NZI5 618 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 AMDHD2Q9Y303 409 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 TIMM22Q9Y584 194 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
VAT1-207ENST00000589828 A8MT66 165 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 hCG_2039718K7EN88 272 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 SULT2B1O00204 365 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 SMIM24O75264 130 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 ULK1O75385 1050 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 KRT6AP02538 564 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 KRT6BP04259 564 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 MSMBP08118 114 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 RBP1P09455 135 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 HKR1P10072 659 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 TYK2P29597 1187 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 CALCRP30988 508 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 MAGEA12P43365 314 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 KRT6CP48668 564 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 SUMO3P55854 103 aaPredicted RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 HGFACQ04756 655 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 CLCQ05315 142 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 ZNF763Q0D2J5 394 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 VPS26BQ4G0F5 336 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 HIKESHIQ53FT3 197 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 TSPO2Q5TGU0 170 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 FAHD2BQ6P2I3 314 aaPredicted RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 MTERF4Q7Z6M4 381 aaKnown RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 CREG2Q8IUH2 290 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 CDK20Q8IZL9 346 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 C17orf78Q8N4C9 275 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 OR5W2Q8NH69 310 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 RFWD2Q8NHY2 731 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 WDR60Q8WVS4 1066 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 NEU4Q8WWR8 484 aaPredicted RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 TAF15Q92804 592 aaKnown RBP eCLIP6.88□□□□□ -1.31
VAT1-207ENST00000589828 FAHD2AQ96GK7 314 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 EGLN2Q96KS0 407 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 KCNA7Q96RP8 456 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 DPH5Q9H2P9 285 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 CDC42EP4Q9H3Q1 356 aaKnown RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 MIEF1Q9NQG6 463 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 TREM2Q9NZC2 230 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 EMC3Q9P0I2 261 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 POLR3HQ9Y535 204 aaPredicted RBP6.88□□□□□ -1.31
VAT1-207ENST00000589828 KCNE3Q9Y6H6 103 aa6.88□□□□□ -1.31
VAT1-207ENST00000589828 NPIPB9F8W1W9 429 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 GTPBP1O00178 669 aaKnown RBP6.87□□□□□ -1.31
VAT1-207ENST00000589828 MRPL33O75394 65 aaKnown RBP6.87□□□□□ -1.31
VAT1-207ENST00000589828 PDE5AO76074 875 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 ALOX5P09917 674 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 GAAP10253 952 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 EFNA1P20827 205 aaPredicted RBP6.87□□□□□ -1.31
VAT1-207ENST00000589828 COL8A2P25067 703 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 HMOX2P30519 316 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 THBS4P35443 961 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 GSTM5P46439 218 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 KHKP50053 298 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 SERPINB8P50452 374 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 SLC16A1P53985 500 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 SESN3P58005 492 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 PRPS1P60891 318 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 LMO4P61968 165 aa6.87□□□□□ -1.31
VAT1-207ENST00000589828 POU6F2P78424 691 aaPredicted RBP6.87□□□□□ -1.31
VAT1-207ENST00000589828 NAAAQ02083 359 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms