RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 HS6ST2Q96MM7 605 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 SRXN1Q9BYN0 137 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 NUF2Q9BZD4 464 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 ZNF350Q9GZX5 532 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 BARX1Q9HBU1 254 aaPredicted RBP9.56□□□□□ -0.88
PNN-203ENST00000554117 ACER3Q9NUN7 267 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 PARPBPQ9NWS1 579 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 NKIRAS1Q9NYS0 192 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 CALML5Q9NZT1 146 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 UPB1Q9UBR1 384 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 CHRNA9Q9UGM1 479 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 MGAT4BQ9UQ53 548 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 HDGFL3Q9Y3E1 203 aa9.56□□□□□ -0.88
PNN-203ENST00000554117 VPS13CQ709C8 3753 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 CCT8L1PA6NM43 557 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 ESPNB1AK53 854 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NPIPB9F8W1W9 429 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 SIAH2O43255 324 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 KIAA0513O60268 411 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 EIF1BO60739 113 aaKnown RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 MRPL33O75394 65 aaKnown RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 ERLIN1O75477 346 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 LYZL6O75951 148 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 PMS2P2O95744 297 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 THBDP07204 575 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NR2F1P10589 423 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 OR2B6P58173 313 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 COPZ1P61923 177 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 KCNJ10P78508 379 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 TGFBR3Q03167 851 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 SKP2Q13309 424 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 TOMM34Q15785 309 aaPredicted RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 ZSWIM7Q19AV6 140 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NDUFAF6Q330K2 333 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 TIMM23BQ5SRD1 257 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NCMAPQ5T1S8 102 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 OR7E24Q6IFN5 339 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 ADAM5Q6NVV9 412 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 KLHL24Q6TFL4 600 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 TMEM108Q6UXF1 575 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 ZNF621Q6ZSS3 439 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 TMPPEQ6ZT21 453 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NUFIP2Q7Z417 695 aaKnown RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 ABHD12BQ7Z5M8 362 aaPredicted RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 MTDHQ86UE4 582 aaKnown RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 CMIPQ8IY22 773 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 PEX5LQ8IYB4 626 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 ZNF440Q8IYI8 595 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 GABRG1Q8N1C3 465 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 GLB1L3Q8NCI6 653 aaPredicted RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 WDR60Q8WVS4 1066 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 APH1AQ96BI3 265 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NEURL3Q96EH8 262 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 COX4I2Q96KJ9 171 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 OR52E6Q96RD3 313 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 NPAS1Q99742 590 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 PSD2Q9BQI7 771 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 RMND5AQ9H871 391 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 COQ10BQ9H8M1 238 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 EXOSC3Q9NQT5 275 aaKnown RBP9.55□□□□□ -0.88
PNN-203ENST00000554117 BTNL2Q9UIR0 455 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 PRDM4Q9UKN5 801 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 KCNE3Q9Y6H6 103 aa9.55□□□□□ -0.88
PNN-203ENST00000554117 CCDC154A6NI56 674 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 ITM2AO43736 263 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 FCMRO60667 390 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 GCM2O75603 506 aaPredicted RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 KRT33AO76009 404 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 DBIP07108 87 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 PAX1P15863 534 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 CREB1P16220 341 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 BGNP21810 368 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 CXCR1P25024 350 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 SHC1P29353 583 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 POLR2HP52434 150 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 CASP9P55211 416 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 SLC35A1P78382 337 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 ZNF844Q08AG5 666 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 CASP8Q14790 479 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 PDK3Q15120 406 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 TAB1Q15750 504 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 NRF1Q16656 503 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 SPANXN4Q5MJ08 99 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 AGAP6Q5VW22 663 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 SAXO2Q658L1 398 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 TYW3Q6IPR3 259 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 HEPHL1Q6MZM0 1159 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 CLEC4FQ8N1N0 589 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 ANKRD42Q8N9B4 389 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 SMAP2Q8WU79 429 aaPredicted RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 RAB8BQ92930 207 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 MARK4Q96L34 752 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 ADAD1Q96M93 576 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 TRNT1Q96Q11 434 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 TAPBPLQ9BX59 468 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 QRSL1Q9H0R6 528 aaKnown RBP9.54□□□□□ -0.88
PNN-203ENST00000554117 RAD21L1Q9H4I0 556 aa9.54□□□□□ -0.88
PNN-203ENST00000554117 MEAF6Q9HAF1 191 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms