RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SPHK1Q9NYA1 384 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 FBXL2Q9UKC9 423 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TCRBV5S2A0A599 114 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 MTMR11A4FU01 709 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 HOXB9P17482 250 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SLC6A8P48029 635 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 TNFRSF17Q02223 184 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 AQP6Q13520 282 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 TP53I3Q53FA7 332 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SUSD1Q6UWL2 747 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 DLEU7Q6UYE1 221 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 LIX1LQ8IVB5 337 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 KIAA1958Q8N8K9 716 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 OR52I1Q8NGK6 324 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 YIPF5Q969M3 257 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 IGSF8Q969P0 613 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 MYADMQ96S97 322 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 NICN1Q9BSH3 213 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 POLMQ9NP87 494 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ACTL7AQ9Y615 435 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 DFFBO76075 338 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ACTR1BP42025 376 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 MRPL19P49406 292 aaKnown RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 CAV2P51636 162 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ACTR1AP61163 376 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 YIF1BQ5BJH7 314 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 PRAMEF19Q5SWL8 479 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ARHGAP40Q5TG30 622 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SULF2Q8IWU5 870 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 COMMD1Q8N668 190 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 F2RL3Q96RI0 385 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 KCNK12Q9HB15 430 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SRA1Q9HD15 236 aaKnown RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 CNIH4Q9P003 139 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 MAFFQ9ULX9 164 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SNX11Q9Y5W9 270 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 I6L893 689 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 AGPAT2O15120 278 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 BET1O15155 118 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 CLEC3AO75596 197 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 HRGP04196 525 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 HEXBP07686 556 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 C8orf89P0DMQ9 161 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 GABRB1P18505 474 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SIRPAP78324 504 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 CTU2Q2VPK5 515 aaKnown RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 MLIPQ5VWP3 458 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 Q6ZVU0 165 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 FCRLAQ7L513 359 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF619Q8N2I2 560 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 TRIB2Q92519 343 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 NINJ1Q92982 152 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 GKN1Q9NS71 199 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 C1orf123Q9NWV4 160 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
PTCH1-212ENST00000546744 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
PTCH1-212ENST00000546744 A6NL46 340 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 AIPO00170 330 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 GFRA2O00451 464 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 APBB3O95704 486 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 BPNT1O95861 308 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 FPR3P25089 353 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 CALCRP30988 508 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 RFX2P48378 723 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PGGT1BP53609 377 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 RPS26P62854 115 aaKnown RBP11.98□□□□□ -0.49
PTCH1-212ENST00000546744 RAB31Q13636 194 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 STEAP1BQ6NZ63 245 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 CORO6Q6QEF8 472 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 VITQ6UXI7 678 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 OR4K17Q8NGC6 315 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 OR2A12Q8NGT7 310 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SH3RF2Q8TEC5 729 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 BPIFA2Q96DR5 249 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 ZIC5Q96T25 663 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PCYT2Q99447 389 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SLC38A3Q99624 504 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 TTTY10Q9BZA0 68 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PTGES2Q9H7Z7 377 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 C2orf42Q9NWW7 574 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 OR2T1O43869 369 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PPP1R3DO95685 299 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 GASTP01350 101 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SPOCK1Q08629 439 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 Q499Y3 187 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SERINC5Q86VE9 423 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SORCS2Q96PQ0 1159 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 INTS14Q96SY0 518 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 A4GALTQ9NPC4 353 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 DRGXA6NNA5 263 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 MMP2P08253 660 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PAX6P26367 422 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 THBS2P35442 1172 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms