RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ELAVL3Q14576 367 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 CPOQ8IVL8 374 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 OR5M3Q8NGP4 307 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 MIR1-1HGQ9H1L0 117 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 LMAN1LQ9HAT1 526 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ANHXE9PGG2 379 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ALPIP09923 528 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 DTYMKP23919 212 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 RAB35Q15286 201 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TMEM225Q6GV28 225 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ABHD12BQ7Z5M8 362 aaPredicted RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 OR52E2Q8NGJ4 325 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 HBQ1P09105 142 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 SOX2P48431 317 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 EIF2B1Q14232 305 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 CFAP77Q6ZQR2 320 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 FGGYQ96C11 551 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 NSUN5Q96P11 429 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 PTPN18Q99952 460 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 SLC2A4RGQ9NR83 387 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 LAMP3Q9UQV4 416 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PPP5D1E7EU14 171 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ABHD16AO95870 558 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TCRBP04435 133 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 GABRA2P47869 451 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 KDM4DQ6B0I6 523 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 SIGIRRQ6IA17 410 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 WBP2NLQ6ICG8 309 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TREX1Q9NSU2 369 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 MAN2C1Q9NTJ4 1040 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 COQ3Q9NZJ6 369 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 GNG13Q9P2W3 67 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 GPR37L1O60883 481 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 CLEC3AO75596 197 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TFAP2AP05549 437 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 F2RL1P55085 397 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 C19orf57Q0VDD7 668 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 RAB30Q15771 203 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 SGCBQ16585 318 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 SCAMP5Q8TAC9 235 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 WFIKKN1Q96NZ8 548 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PLEKHA2Q9HB19 425 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ZNF136P52737 540 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PIGFQ07326 219 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PDE7AQ13946 482 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 PAN3Q58A45 887 aaKnown RBP7.87□□□□□ -1.15
HTT-208ENST00000510626 TREML2Q5T2D2 321 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 CADM3Q8N126 398 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 KCNG3Q8TAE7 436 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 TMIGD2Q96BF3 282 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 RAB22AQ9UL26 194 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 ENTPD2Q9Y5L3 495 aa7.87□□□□□ -1.15
HTT-208ENST00000510626 LAMP1P11279 417 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ZNF280AP59817 542 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 OR4D1Q15615 310 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ZNF322Q6U7Q0 402 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 LCTLQ6UWM7 567 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 PAQR8Q8TEZ7 354 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 KATNB1Q9BVA0 655 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM38AQ9H6F2 299 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 CACNA1GO43497 2377 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 OR10A3P58181 314 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 PCBD1P61457 104 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 GPLD1P80108 840 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 GPR157Q5UAW9 335 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 HRH4Q9H3N8 390 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 DMRT3Q9NQL9 472 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SH3RF2Q8TEC5 729 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 NXF2Q9GZY0 626 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 RRAGCQ9HB90 399 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FABP7O15540 132 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ANGPTL7O43827 346 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 KLK3P07288 261 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 ADGRG3Q86Y34 549 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 RNF170Q96K19 258 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 BACE2Q9Y5Z0 518 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 A0A0U1RQF3 1178 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM218A2RU14 115 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 I6L893 689 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 ATP1B1P05026 303 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SOX18P35713 384 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SLC35D2Q76EJ3 337 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 CLEC4CQ8WTT0 213 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ESAMQ96AP7 390 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ZNF582Q96NG8 517 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM43Q9BTV4 400 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 C11orf84Q9BUA3 381 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 LDAHQ9H6V9 325 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FN3KRPQ9HA64 309 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TUBG2Q9NRH3 451 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 CD84Q9UIB8 345 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms