RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SH3GLB1Q9Y371 365 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 E9PLN8 166 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 M0R3H8 397 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CCL21O00585 134 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 SEC14L5O43304 696 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 SERPINA1P01009 418 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CXCR1P25024 350 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF136P52737 540 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 PER3P56645 1201 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 HOXC5Q00444 222 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 EMC4Q5J8M3 183 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 POMZP3Q6PJE2 187 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CCDC121Q6ZUS5 278 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 ESPNLQ6ZVH7 1005 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 FKBP9P1Q75LS8 142 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CBLL1Q75N03 491 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 COMTD1Q86VU5 262 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 ATP6V1C2Q8NEY4 427 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 DNAJA4Q8WW22 397 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-235ENST00000495515 SLC7A6OSQ96CW6 309 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-235ENST00000495515 KLHL15Q96M94 604 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 NSMCE2Q96MF7 247 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 MCHR1Q99705 422 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 NPAS1Q99742 590 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 VKORC1Q9BQB6 163 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 RSPO3Q9BXY4 272 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-235ENST00000495515 ADAM19Q9H013 955 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 TMEM185BQ9H7F4 350 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 CHRNA9Q9UGM1 479 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 SLC5A6Q9Y289 635 aa15.42■□□□□ 0.06
HDAC6-235ENST00000495515 POLEQ07864 2286 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 TMED7-TICAM2A0A0A6YYA0 188 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 EIF1AYO14602 144 aaKnown RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ARPC2O15144 300 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 DNAJC8O75937 253 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 SLC7A1P30825 629 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 IFNA8P32881 189 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 CLK1P49759 484 aaKnown RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 KCNC4Q03721 635 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 TRIM25Q14258 630 aaKnown RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 SGCBQ16585 318 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 TMEM176BQ3YBM2 270 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 IFI44LQ53G44 452 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 C1orf185Q5T7R7 199 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ULK3Q6PHR2 472 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 B3GNT6Q6ZMB0 384 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 CARM1Q86X55 608 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 OR6T1Q8NGN1 323 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 VANGL1Q8TAA9 524 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 POP5Q969H6 163 aaKnown RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 MCUR1Q96AQ8 359 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF524Q96C55 264 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 C12orf10Q9HB07 376 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 TIGARQ9NQ88 270 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 DCAF13Q9NV06 445 aaKnown RBP15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ACTR3BQ9P1U1 418 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 OSGIN1Q9UJX0 560 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 MEMO1Q9Y316 297 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 TMED7Q9Y3B3 224 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF407Q9C0G0 2248 aa15.41■□□□□ 0.06
HDAC6-235ENST00000495515 ADAMDEC1O15204 470 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 LRRTM2O43300 516 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF208O43345 1280 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 PDE5AO76074 875 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 TFPIP10646 304 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 PNMTP11086 282 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 IL11P20809 199 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 SFTPDP35247 375 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 MSX2P35548 267 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 CLDN20P56880 219 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 OR1Q1Q15612 314 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 ACSF3Q4G176 576 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 SYT14P1Q58G82 188 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 MTX3Q5HYI7 312 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 SWT1Q5T5J6 900 aaKnown RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF613Q6PF04 617 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 GGNQ86UU5 652 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 FJX1Q86VR8 437 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 ADGRG3Q86Y34 549 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 LACC1Q8IV20 430 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 OR2V1Q8NHB1 315 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 PHF10Q8WUB8 498 aaKnown RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 GEMIN6Q8WXD5 167 aaKnown RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 C3orf49Q96BT1 292 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 DDIT4LQ96D03 193 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 SLC47A1Q96FL8 570 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 POLR2J2Q9GZM3 115 aaKnown RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 PCDHAC1Q9H158 963 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 POLR2J3Q9H1A7 115 aaKnown RBP15.4■□□□□ 0.06
HDAC6-235ENST00000495515 CALHM2Q9HA72 323 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 NCKAP5O14513 1909 aa15.4■□□□□ 0.06
HDAC6-235ENST00000495515 DNAJC13O75165 2243 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 A0A1B0GWA3 101 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 CD8B2A6NJW9 211 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ELOA3DA6NLF2 546 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-235ENST00000495515 EFNA2O43921 213 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 OPN1LWP04000 364 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 IFNW1P05000 195 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 CCNA2P20248 432 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms