RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PGCP20142 388 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 COX5AP20674 150 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 PGM1P36871 562 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 ETV4P43268 484 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 DMTNQ08495 405 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 PDCD2Q16342 344 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-205ENST00000485397 SYT14P1Q58G82 188 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 HEPHL1Q6MZM0 1159 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 EIF3MQ7L2H7 374 aaKnown RBP16.99■□□□□ 0.31
COL27A1-205ENST00000485397 ANKRD46Q86W74 232 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 TMEM234Q8WY98 164 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 RAB8BQ92930 207 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 MUCL1Q96DR8 90 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 PKNOX2Q96KN3 472 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 AKTIPQ9H8T0 292 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 EXD2Q9NVH0 621 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 ASIC5Q9NY37 505 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 SONP18583 2426 aaKnown RBP16.99■□□□□ 0.31
COL27A1-205ENST00000485397 WDR91A4D1P6 747 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 RNASET2O00584 256 aaKnown RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 TYROBPO43914 113 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 KIAA0513O60268 411 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 SCN2BO60939 215 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ADAM11O75078 769 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 PGM3O95394 542 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 CPSF4O95639 269 aaKnown RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 GGT1P19440 569 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 CDH11P55287 796 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 VSNL1P62760 191 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 CSNK2A1P68400 391 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 PHC1P78364 1004 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 TIMM23BQ5SRD1 257 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ABLIM2Q6H8Q1 611 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 TYW3Q6IPR3 259 aaKnown RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 TNFAIP8L2Q6P589 184 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 HMGN2P46Q86SG4 172 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 MTDHQ86UE4 582 aaKnown RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 NUDCD3Q8IVD9 361 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF433Q8N7K0 673 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF781Q8N8C0 355 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 XAGE5Q8WWM1 108 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ZG16BQ96DA0 208 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ROPN1BQ9BZX4 212 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ALG2Q9H553 416 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ROPN1Q9HAT0 212 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-205ENST00000485397 CTPS2Q9NRF8 586 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 PCDHGB4Q9UN71 923 aa16.98■□□□□ 0.31
COL27A1-205ENST00000485397 ABCA1O95477 2261 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 OR5H1A6NKK0 313 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 ABCD4O14678 606 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 RYKP34925 604 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 FUT5Q11128 374 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 SMU1Q2TAY7 513 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 DNM1P46Q6ZS02 220 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 CXXC5Q7LFL8 322 aaKnown RBP16.97■□□□□ 0.31
COL27A1-205ENST00000485397 DTX2Q86UW9 622 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 UBE2J2Q8N2K1 259 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 FAM71CQ8NEG0 241 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 OR8J2Q8NGG1 315 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF563Q8TA94 476 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 SLC25A43Q8WUT9 341 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-205ENST00000485397 ARL5BQ96KC2 179 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 CCDC106Q9BWC9 280 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 DPY30Q9C005 99 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 WDR45Q9Y484 360 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 CR1P17927 2039 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 RTTNQ86VV8 2226 aa16.97■□□□□ 0.31
COL27A1-205ENST00000485397 CHD3Q12873 2000 aaKnown RBP16.96■□□□□ 0.31
COL27A1-205ENST00000485397 IGKV3D-15A0A087WSY6 115 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 CLDN24A6NM45 220 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF716A6NP11 495 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 RAD51DO75771 328 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 C1QCP02747 245 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 UQCRC2P22695 453 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 NTF4P34130 210 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 APOBEC1P41238 236 aaKnown RBP16.96■□□□□ 0.31
COL27A1-205ENST00000485397 PLAURQ03405 335 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 PDK3Q15120 406 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 ATAD3BQ5T9A4 648 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 FBXW9Q5XUX1 488 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 FRRS1Q6ZNA5 592 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 P2RY8Q86VZ1 359 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 ROPN1LQ96C74 230 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 HS6ST2Q96MM7 605 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 OR11A1Q9GZK7 315 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 EMC3Q9P0I2 261 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 CHRNA9Q9UGM1 479 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 B3GALT5Q9Y2C3 310 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 SLC35A3Q9Y2D2 325 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 NOSIPQ9Y314 301 aaKnown RBP16.96■□□□□ 0.31
COL27A1-205ENST00000485397 ALPK2Q86TB3 2170 aa16.96■□□□□ 0.31
COL27A1-205ENST00000485397 PRSS51A0A1B0GVH4 220 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 A0A1W2PR80 420 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 TP53P04637 393 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-205ENST00000485397 CCNA2P20248 432 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 FOXG1P55316 489 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-205ENST00000485397 CHI3L2Q15782 390 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 SAXO2Q658L1 398 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms