RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 IL17CQ9P0M4 197 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TAC3Q9UHF0 121 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CHD4Q14839 1912 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ELOA3CA0A087WX78 387 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 UPK3BL1B0FP48 263 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 UPK3BL2E5RIL1 263 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NPIPA5E9PKD4 350 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 KIAA0355O15063 1070 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 HCRTR2O43614 444 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 GPR32O75388 356 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 POP7O75817 140 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NCR1O76036 304 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 H2BFMP0C1H6 154 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ELAVL4P26378 380 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 IL12BP29460 328 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 BMPR1AP36894 532 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RFC3P40938 356 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MAP2K6P52564 334 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PITX1P78337 314 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ARHGAP40Q5TG30 622 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM244Q5VVB8 128 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 HEPHL1Q6MZM0 1159 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MDGA2Q7Z553 956 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MRPL10Q7Z7H8 261 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LRRTM4Q86VH4 590 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC22A15Q8IZD6 547 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR13C3Q8NGS6 347 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PXYLP1Q8TE99 480 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 C2CD4CQ8TF44 421 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SMIM4Q8WVI0 70 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LINC01599Q8WXQ3 324 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TFGQ92734 400 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LRIG1Q96JA1 1093 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NIPSNAP1Q9BPW8 284 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR52D1Q9H346 318 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZDHHC4Q9NPG8 344 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SERINC1Q9NRX5 453 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NPIPA1Q9UND3 350 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MOKQ9UQ07 419 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 A0A0B4J2A0 478 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM218A2RU14 115 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM212A6NML5 194 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 PSMD9O00233 223 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 HAPLN1P10915 354 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SNCAP37840 140 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 OPRD1P41143 372 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SHC2P98077 582 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 HYAL2Q12891 473 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 UPP1Q16831 310 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 Q499Y3 187 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TP53I3Q53FA7 332 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 RAB6CQ53S08 254 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SYT14P1Q58G82 188 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ZMAT1Q5H9K5 638 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ALG10BQ5I7T1 473 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SPIN3Q5JUX0 258 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 OTUD1Q5VV17 481 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 PRAMEF18Q5VWM3 479 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TPGS2Q68CL5 300 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SLC8B1Q6J4K2 584 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 PET117Q6UWS5 81 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 RNF165Q6ZSG1 346 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 LNX2Q8N448 690 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 OR4F15Q8NGB8 312 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM18Q96B42 140 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 NUS1Q96E22 293 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF558Q96NG5 402 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 NECTIN4Q96NY8 510 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 OR11A1Q9GZK7 315 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 MCOLN1Q9GZU1 580 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ENKD1Q9H0I2 346 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 RAB6CQ9H0N0 254 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 DLL4Q9NR61 685 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 MMP26Q9NRE1 261 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 OSER1Q9NX31 292 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF226Q9NYT6 803 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 SHPKQ9UHJ6 478 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 CD84Q9UIB8 345 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TMEFF2Q9UIK5 374 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ADAM29Q9UKF5 820 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 YARS2Q9Y2Z4 477 aaKnown RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 PUS1Q9Y606 427 aaKnown RBP eCLIP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 LRIT2A6NDA9 550 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 M0R3H8 397 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 BHLHE40O14503 412 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 MAGEB4O15481 346 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 KLK8O60259 260 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 GBAP04062 536 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 GP1BBP13224 206 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TBPP20226 339 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 ITGB7P26010 798 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 GNRHRP30968 328 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 CD52P31358 61 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 GJA5P36382 358 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 TAGLN2P37802 199 aaKnown RBP4.68□□□□□ -1.66
PCDH9-203ENST00000456367 CX3CR1P49238 355 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 IFITM2Q01629 132 aa4.68□□□□□ -1.66
PCDH9-203ENST00000456367 MFGE8Q08431 387 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms