RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ACAD8Q9UKU7 415 aa13.96□□□□□ -0.17
PDGFB-202ENST00000381551 AP4B1Q9Y6B7 739 aa13.96□□□□□ -0.17
PDGFB-202ENST00000381551 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 A0A1B0GWA3 101 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 H3BML4 177 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 STAMBPO95630 424 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 PEPDP12955 493 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF708P17019 499 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 ELK4P28324 431 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 POLR2HP52434 150 aaKnown RBP13.95□□□□□ -0.18
PDGFB-202ENST00000381551 SUCLG1P53597 346 aaKnown RBP13.95□□□□□ -0.18
PDGFB-202ENST00000381551 CLDN15P56746 228 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 CLDN18P56856 261 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 EMC4Q5J8M3 183 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 ENTPD8Q5MY95 495 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 TSEN54Q7Z6J9 526 aaKnown RBP13.95□□□□□ -0.18
PDGFB-202ENST00000381551 ZGRF1Q86YA3 2104 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 LILRA2Q8N149 483 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 GALNT11Q8NCW6 608 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 DNAJA4Q8WW22 397 aaPredicted RBP13.95□□□□□ -0.18
PDGFB-202ENST00000381551 GEMIN6Q8WXD5 167 aaKnown RBP13.95□□□□□ -0.18
PDGFB-202ENST00000381551 C3orf49Q96BT1 292 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 C7orf34Q96L11 122 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 TMED7Q9Y3B3 224 aa13.95□□□□□ -0.18
PDGFB-202ENST00000381551 A0A0B4J2E0 115 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 A0A1B0GX12 115 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 CPSF4LA6NMK7 179 aaKnown RBP13.94□□□□□ -0.18
PDGFB-202ENST00000381551 BCKDKO14874 412 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 OPN1LWP04000 364 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 THY1P04216 161 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 SEMG1P04279 462 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 IFNW1P05000 195 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 POU3F2P20265 443 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-202ENST00000381551 MAP2K6P52564 334 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 CDH12P55289 794 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 RBPJQ06330 500 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 FLOT2Q14254 428 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF613Q6PF04 617 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 POMZP3Q6PJE2 187 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 Q6ZPB1 254 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF605Q86T29 641 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 ATG4DQ86TL0 474 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-202ENST00000381551 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 POP5Q969H6 163 aaKnown RBP13.94□□□□□ -0.18
PDGFB-202ENST00000381551 LRGUKQ96M69 825 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 PRDM14Q9GZV8 571 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 C12orf10Q9HB07 376 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 STOML1Q9UBI4 398 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 RPS6KB2Q9UBS0 482 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 V9GYQ6 96 aa13.94□□□□□ -0.18
PDGFB-202ENST00000381551 H0YC42 278 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ADAMDEC1O15204 470 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF208O43345 1280 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 SLC19A2O60779 497 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 LYPD3O95274 346 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ABOP16442 354 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 CCNA2P20248 432 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 CXCR1P25024 350 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 FKBP2P26885 142 aaKnown RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 SHC1P29353 583 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 TPD52P55327 224 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 CLDN20P56880 219 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 MRPL49Q13405 166 aaKnown RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 PIN1Q13526 163 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 TMEM176BQ3YBM2 270 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 IQCCQ4KMZ1 466 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ALG10BQ5I7T1 473 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 WLSQ5T9L3 541 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 DEF8Q6ZN54 512 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 GGNQ86UU5 652 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ATCAYQ86WG3 371 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 DOLPP1Q86YN1 238 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ATP6V1C2Q8NEY4 427 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 OR5M9Q8NGP3 310 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 SLC47A1Q96FL8 570 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 TRIM15Q9C019 465 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
PDGFB-202ENST00000381551 TMEM185BQ9H7F4 350 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 PNPLA3Q9NST1 481 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 A4GNTQ9UNA3 340 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 ENPP4Q9Y6X5 453 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 NBASA2RRP1 2371 aa13.93□□□□□ -0.18
PDGFB-202ENST00000381551 RP1L1Q8IWN7 2480 aaPredicted RBP13.92□□□□□ -0.18
PDGFB-202ENST00000381551 GCN1Q92616 2671 aaKnown RBP13.92□□□□□ -0.18
PDGFB-202ENST00000381551 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
PDGFB-202ENST00000381551 POLEQ07864 2286 aa13.92□□□□□ -0.18
PDGFB-202ENST00000381551 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
PDGFB-202ENST00000381551 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
PDGFB-202ENST00000381551 PRRG2O14669 202 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms