RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 FAM111BQ6SJ93 734 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 MAFIPQ8WZ33 124 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SNAPC3Q92966 411 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 C16orf58Q96GQ5 468 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 NXF5Q9H1B4 397 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 ANKRD30BLA7E2S9 258 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 MLLT11Q13015 90 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 TMEM53Q6P2H8 277 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 MTFR2Q6P444 385 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 NCCRP1Q6ZVX7 275 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 RTN4RL1Q86UN2 441 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 PDZD9Q8IXQ8 264 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 GGHQ92820 318 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 ITPKCQ96DU7 683 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SLC6A20Q9NP91 592 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 VSX1Q9NZR4 365 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SSX5O60225 188 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 CHRM4P08173 479 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 EGFL6Q8IUX8 553 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SERPINA12Q8IW75 414 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 OR4F15Q8NGB8 312 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 GLYATL2Q8WU03 294 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 ARL5BQ96KC2 179 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SPIN2AQ99865 258 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SPIN2BQ9BPZ2 258 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 NUDT21O43809 227 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SLCO2B1O94956 709 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 REEP5Q00765 189 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 EIF2S3LQ2VIR3 472 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 VRK3Q8IV63 474 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 SGPP2Q8IWX5 399 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 THAP7Q9BT49 309 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 ULBP2Q9BZM5 246 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 OBP2AQ9NY56 170 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 CACNG2Q9Y698 323 aa16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 MYO5AQ9Y4I1 1855 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3-204ENST00000377656 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 PDE7AQ13946 482 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 KCTD20Q7Z5Y7 419 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 NXPE3Q969Y0 559 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 EMC3Q9P0I2 261 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 RASD1Q9Y272 281 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 KDM4EB2RXH2 506 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 SCGB2A1O75556 95 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 APOC3P02656 99 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 F13BP05160 661 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ICAM2P13598 275 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 SF3A2Q15428 464 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 STK11Q15831 433 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 HSF5Q4G112 596 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 FOXRED1Q96CU9 486 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 BRWD1Q9NSI6 2320 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 FAM230AA0A1W2PPH8 454 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 TFAP2AP05549 437 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ADARB1P78563 741 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 SMN1Q16637 294 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 OR7E24Q6IFN5 339 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 SYNPRQ8TBG9 265 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ZFP90Q8TF47 636 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 EDAQ92838 391 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 GCDHQ92947 438 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ST6GALNAC5Q9BVH7 336 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 BOKQ9UMX3 212 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 B3GALT1Q9Y5Z6 326 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 TRBV4-1A0A0J9YWV2 114 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 RFXAPO00287 272 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 PRAF2O60831 178 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ACPPP15309 386 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 SMAD2Q15796 467 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 TMEM52BQ4KMG9 183 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 GPR157Q5UAW9 335 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 VASNQ6EMK4 673 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 OR13C2Q8NGS9 318 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 WDR83Q9BRX9 315 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ZNF576Q9H609 170 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 ITGB4P16144 1822 aa16.59■□□□□ 0.25
CNTNAP3-204ENST00000377656 WFDC5Q8TCV5 224 aa16.58■□□□□ 0.25
CNTNAP3-204ENST00000377656 EGLN3Q9H6Z9 239 aa16.58■□□□□ 0.25
CNTNAP3-204ENST00000377656 USP22Q9UPT9 525 aa16.58■□□□□ 0.25
CNTNAP3-204ENST00000377656 CDK4P11802 303 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 AFF3P51826 1226 aaKnown RBP16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 TAS2R31P59538 309 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 P2RY14Q15391 338 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 CNN3Q15417 329 aaKnown RBP16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 BCL7AQ4VC05 210 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 ELOVL3Q9HB03 270 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 RAB9BQ9NP90 201 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 C1GALT1Q9NS00 363 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 FGF21Q9NSA1 209 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 DNAJB11Q9UBS4 358 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 NUBP2Q9Y5Y2 271 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 GOSR2O14653 212 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 GPRIN2O60269 458 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 SERPINE2P07093 398 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 AKAIN1P0CW23 69 aa16.58■□□□□ 0.24
CNTNAP3-204ENST00000377656 SSTR4P31391 388 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms