RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TTTY10Q9BZA0 68 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 FAM120CQ9NX05 1096 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 C17orf112F2Z3M2 114 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 H2BFMP0C1H6 154 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF44P15621 663 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 GJA4P35212 333 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR4D2P58180 307 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ID2Q02363 134 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 HNRNPA1L2Q32P51 320 aaKnown RBP13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 CCNJQ5T5M9 372 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF836Q6ZNA1 936 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 FAM213BQ8TBF2 198 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNRF4Q8WWF5 429 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 SGK3Q96BR1 496 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 HDHD5Q9BXW7 423 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 FAM227AF5H4B4 570 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC16A5O15375 505 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACTL6BO94805 426 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL33O95760 270 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ITGB7P26010 798 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 DSC1Q08554 894 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF74Q16587 644 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 ENTHD1Q8IYW4 607 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 MFSD9Q8NBP5 474 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 DYRK2Q92630 601 aa13.21□□□□□ -0.3
RAPGEF1-202ENST00000372190 COL18A1P39060 1754 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 A0A0B4J2A0 478 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF736B4DX44 427 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 TMX2-CTNND1H3BSU7 103 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACPPP15309 386 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 WNT7BP56706 349 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 CACNA1SQ13698 1873 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 BEX5Q5H9J7 111 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL17RCQ8NAC3 791 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 TMEM104Q8NE00 496 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 RBP7Q96R05 134 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 CDH20Q9HBT6 801 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 CCM2LQ9NUG4 571 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 SHPKQ9UHJ6 478 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 P2RX6O15547 441 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 NME1P15531 152 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACVR1BP36896 505 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 SPINT3P49223 89 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 RAB1AP62820 205 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 RPS27LQ71UM5 84 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZFP90Q8TF47 636 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 HOXB13Q92826 284 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 METTL17Q9H7H0 456 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 EXOGQ9Y2C4 368 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 LATO43561 262 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 SERPINE2P07093 398 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 RPS15AP62244 130 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 RETREG3Q86VR2 466 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 KLHL13Q9P2N7 655 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 B4GALT7Q9UBV7 327 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 URGCP-MRPS24S4R325 110 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 NME2P22392 152 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 P2RY2P41231 377 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 MEP1BQ16820 701 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 B3GLCTQ6Y288 498 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF761Q86XN6 746 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 TMEFF1Q8IYR6 380 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 SIGLEC10Q96LC7 697 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 MYH6P13533 1939 aa13.2□□□□□ -0.3
RAPGEF1-202ENST00000372190 LOC102723532A0A0G2JNH3 316 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC22A23A1A5C7 686 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 MROH6A6NGR9 719 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZBTB42B2RXF5 422 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PRICKLE3O43900 615 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SYNGR4O95473 234 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 MAS1P04201 325 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PYCR1P32322 319 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 THBS2P35442 1172 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PCP4P48539 62 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 BCL7AQ4VC05 210 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 FJX1Q86VR8 437 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZDHHC14Q8IZN3 488 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 M0R2Z0 102 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 DEDDO75618 318 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 EBLN1P0CF75 366 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SPP1P10451 314 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms