RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 hCG_2039718K7EN88 272 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 PGRMC1O00264 195 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 MANBAO00462 879 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 SEC31AO94979 1220 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 KCNH1O95259 989 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 FSHBP01225 129 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 C2P06681 752 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 PCMT1P22061 227 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 COL8A2P25067 703 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 CALRP27797 417 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 THBS4P35443 961 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 KHKP50053 298 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDH13P55290 713 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 DUSP5Q16690 384 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 FBLN7Q53RD9 439 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 TECRLQ5HYJ1 363 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 EXOSC6Q5RKV6 272 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF551Q7Z340 670 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 C1QL2Q7Z5L3 287 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 CCDC103Q8IW40 242 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 TOR1AIP2Q8NFQ8 470 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 UBASH3BQ8TF42 649 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 WDR60Q8WVS4 1066 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 ATP6V1E2Q96A05 226 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 PHF21BQ96EK2 531 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 C16orf58Q96GQ5 468 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR5B2Q96R09 309 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 JMJD8Q96S16 334 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 SUCNR1Q9BXA5 334 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 RAB1BQ9H0U4 201 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 TPK1Q9H3S4 243 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 BRF2Q9HAW0 419 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 TPSG1Q9NRR2 321 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC7A10Q9NS82 523 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 DDX18Q9NVP1 670 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 MED29Q9NX70 200 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 VPS29Q9UBQ0 182 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 OPN4Q9UHM6 478 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZDHHC2Q9UIJ5 367 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 MRTO4Q9UKD2 239 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 NOSIPQ9Y314 301 aaKnown RBP7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 GRIP1Q9Y3R0 1128 aa7.32□□□□□ -1.24
HMGB1P39-201ENST00000366304 GNG14A0A1W2PPG7 69 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 GJE1A6NN92 205 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ETV2O00321 342 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 DEAF1O75398 565 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 PDE5AO76074 875 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR4F21O95013 312 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 PNPP00491 289 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 HPXP02790 462 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 RPS17P08708 135 aaKnown RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 CELA3BP08861 270 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 DDCP20711 480 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 MDKP21741 143 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 CRABP2P29373 138 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC7A1P30825 629 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ASMTP46597 345 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 DIO1P49895 249 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 PSMD4P55036 377 aaKnown RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TUBA1BP68363 451 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TUBA4AP68366 448 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 IL1RL1Q01638 556 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNHIT3Q15649 155 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ADRM1Q16186 407 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC25A53Q5H9E4 307 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TSPO2Q5TGU0 170 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR7E24Q6IFN5 339 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 FAM71E1Q6IPT2 247 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TUBA1AQ71U36 451 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 RHOUQ7L0Q8 258 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 SAMD14Q8IZD0 417 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 SIGLECL1Q8N7X8 197 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF483Q8TF39 744 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 NEU4Q8WWR8 484 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 YIPF5Q969M3 257 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 PBKQ96KB5 322 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TRIM31Q9BZY9 425 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 UBQLN4Q9NRR5 601 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 GIN1Q9NXP7 522 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 AMDHD2Q9Y303 409 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 TNPO3Q9Y5L0 923 aaKnown RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 ACTL7BQ9Y614 415 aa7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 HEATR1Q9H583 2144 aaKnown RBP7.31□□□□□ -1.24
HMGB1P39-201ENST00000366304 A0A1W2PQD3 144 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 DNAJC9-AS1A6NH13 148 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 KIF2AO00139 706 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 NR5A2O00482 541 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 KLHL2O95198 593 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 NUDT14O95848 222 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ADRA2AP08913 450 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SBK3P0C264 359 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 CECR9P0C854 216 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 TIA1P31483 386 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SPRP35270 261 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 RBMXP38159 391 aaKnown RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC16A1P53985 500 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 KRTAP10-3P60369 221 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms