RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FAM71CQ8NEG0 241 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 OR4D11Q8NGI4 311 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 CA5BP1Q8WTZ4 195 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 CNOT9Q92600 299 aaKnown RBP8.55□□□□□ -1.04
PHGDH-228ENST00000641847 SLCO4A1Q96BD0 722 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 DUS3LQ96G46 650 aaKnown RBP8.55□□□□□ -1.04
PHGDH-228ENST00000641847 SH3YL1Q96HL8 342 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-228ENST00000641847 SIGLEC12Q96PQ1 595 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 FOXC2Q99958 501 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 WFDC6Q9BQY6 131 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 RTN4RQ9BZR6 473 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 RNF32Q9H0A6 362 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
PHGDH-228ENST00000641847 S100A14Q9HCY8 104 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-228ENST00000641847 LRFN1Q9P244 771 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 SLC9A8Q9Y2E8 581 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 CARD8Q9Y2G2 431 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 WIF1Q9Y5W5 379 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 STAB1Q9NY15 2570 aa8.55□□□□□ -1.04
PHGDH-228ENST00000641847 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 OR5H15A6NDH6 313 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 G3V3Y1 287 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 H3BNX3 289 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF264O43296 627 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 HCRTR2O43614 444 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 GMFGO60234 142 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 SLC25A12O75746 678 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 NEURL1O76050 574 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 RASAL1O95294 804 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 P04436 131 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 HOXB6P17509 224 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ADH7P40394 386 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CASP3P42574 277 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 MAGEA2P43356 314 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CCR4P51679 360 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 GAS1P54826 345 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 VLDLRP98155 873 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 RCN1Q15293 331 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 NPTX1Q15818 432 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 SPINK14Q6IE38 97 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ZFP1Q6P2D0 407 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 AAGABQ6PD74 315 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 DEF8Q6ZN54 512 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 RANBP3LQ86VV4 465 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 GRAMD2AQ8IUY3 354 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ZDHHC21Q8IVQ6 265 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF440Q8IYI8 595 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 PSD4Q8NDX1 1056 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 MDS2Q8NDY4 140 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CATSPER1Q8NEC5 780 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 OR6T1Q8NGN1 323 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 C7orf34Q96L11 122 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CHID1Q9BWS9 393 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 AMBRA1Q9C0C7 1298 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ENKD1Q9H0I2 346 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 YY1AP1Q9H869 796 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 EVA1AQ9H8M9 152 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 EXOSC3Q9NQT5 275 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 SACM1LQ9NTJ5 587 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 ARMC1Q9NVT9 282 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 CNIH4Q9P003 139 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 PPP4R1LQ9P1A2 415 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 TESQ9UGI8 421 aaKnown RBP8.54□□□□□ -1.04
PHGDH-228ENST00000641847 AP4S1Q9Y587 144 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
PHGDH-228ENST00000641847 A0A0G2JMM0 328 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 A0A1W2PPB8 328 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 A0A1W2PRS3 328 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 KIR3DP1A8MWS1 328 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 H0Y3Z8 333 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 AP3D1O14617 1153 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SNPHO15079 494 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 EIF4E2O60573 245 aaKnown RBP8.53□□□□□ -1.04
PHGDH-228ENST00000641847 TIPRLO75663 272 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 FCGR1AP12314 374 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 PRG2P13727 222 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 HTR2AP28223 471 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 DNAJA1P31689 397 aaKnown RBP8.53□□□□□ -1.04
PHGDH-228ENST00000641847 MASP1P48740 699 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 DNASE1L1P49184 302 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 TNFSF10P50591 281 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ADORA2A-AS1P86434 159 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 HOXC5Q00444 222 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 LTBQ06643 244 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 C17orf67Q0P5P2 114 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 EPS8Q12929 822 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SNTA1Q13424 505 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SLC30A6Q6NXT4 461 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 CBLN3Q6UW01 205 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 PLEKHM3Q6ZWE6 761 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms