RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 COL25A1Q9BXS0 654 aaPredicted RBP16.35■□□□□ 0.21
GDE1-203ENST00000564172 VN1R1Q9GZP7 353 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 QRSL1Q9H0R6 528 aaKnown RBP16.35■□□□□ 0.21
GDE1-203ENST00000564172 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
GDE1-203ENST00000564172 VNN3Q9NY84 501 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 C4orf47A7E2U8 309 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 C17orf105B2RV13 164 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 INMTO95050 263 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 CCKBRP32239 447 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 DCTP40126 519 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 MC2RQ01718 297 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 NSDHLQ15738 373 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 CCDC157Q569K6 752 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 OTUD3Q5T2D3 398 aaPredicted RBP16.35■□□□□ 0.21
GDE1-203ENST00000564172 HMGN2P46Q86SG4 172 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 STK32CQ86UX6 486 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 CHDHQ8NE62 594 aaPredicted RBP16.35■□□□□ 0.21
GDE1-203ENST00000564172 PRSS33Q8NF86 280 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 GPR151Q8TDV0 419 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 AKAP1Q92667 903 aaKnown RBP eCLIP16.35■□□□□ 0.21
GDE1-203ENST00000564172 YIPF5Q969M3 257 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 LGALS12Q96DT0 336 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 RDH12Q96NR8 316 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 ZNF416Q9BWM5 594 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 PCDHB16Q9NRJ7 776 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 THSD1Q9NS62 852 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 WDR70Q9NW82 654 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 TRAPPC4Q9Y296 219 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 OTOGLQ3ZCN5 2332 aa16.35■□□□□ 0.21
GDE1-203ENST00000564172 DPM1O60762 260 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 NKX2-2O95096 273 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 ONECUT2O95948 504 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 GABRA3P34903 492 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 PSG6Q00889 435 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 ZNF155Q12901 538 aaPredicted RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 CSRP2Q16527 193 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 AANATQ16613 207 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 FRRS1Q6ZNA5 592 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 SVOPLQ8N434 492 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 COX18Q8N8Q8 333 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 OR5K1Q8NHB7 308 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 FAR1Q8WVX9 515 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 ZNF354BQ96LW1 612 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 VSTM2LQ96N03 204 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 FYTTD1Q96QD9 318 aaKnown RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 OR10A5Q9H207 317 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 FOLH1BQ9HBA9 442 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 DTX4Q9Y2E6 619 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 HRH3Q9Y5N1 445 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 SH3D21A4FU49 640 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 OR6C70A6NIJ9 312 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 AP3D1O14617 1153 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 PRAMEF2O60811 474 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 ZGLP1P0C6A0 271 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 HLA-DMAP28067 261 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 PHC2Q8IXK0 858 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 C8orf59Q8N0T1 100 aaPredicted RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 RORBQ92753 470 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 SENP5Q96HI0 755 aaPredicted RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 SEC22CQ9BRL7 303 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 LMF2Q9BU23 707 aaKnown RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 MTHFD2LQ9H903 347 aaPredicted RBP16.34■□□□□ 0.21
GDE1-203ENST00000564172 PARD6AQ9NPB6 346 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 PPP1R14DQ9NXH3 145 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 TINAGQ9UJW2 476 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 CCDC88CQ9P219 2028 aa16.34■□□□□ 0.21
GDE1-203ENST00000564172 CLDN24A6NM45 220 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 TFECO14948 347 aaPredicted RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 SOX30O94993 753 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 DCST2Q5T1A1 773 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 SYT6Q5T7P8 510 aaPredicted RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 TTC23Q5W5X9 447 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 SHISA6Q6ZSJ9 500 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 C16orf52Q8NHV5 167 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 ST8SIA4Q92187 359 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 CDC6Q99741 560 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 REV1Q9UBZ9 1251 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 ELF5Q9UKW6 265 aaPredicted RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 CLCA3PQ9Y6N3 262 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 RGS5O15539 181 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 CLPSP04118 112 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 IFNW1P05000 195 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 SLC15A1P46059 708 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 FOXL2P58012 376 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 ZMYND11Q15326 602 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 ZNHIT3Q15649 155 aaPredicted RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 ELAVL1Q15717 326 aaKnown RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 OVCH1Q7RTY7 1134 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 COMTD1Q86VU5 262 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 SGTBQ96EQ0 304 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 KLHL15Q96M94 604 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 PIP5K1AQ99755 562 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms