RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NR4A1P22736 598 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 DGKQP52824 942 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MXRA7P84157 204 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 OC90Q02509 493 aaPredicted RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 PRKAA1Q13131 559 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CPTPQ5TA50 214 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 IL34Q6ZMJ4 242 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 RFPL4BQ6ZWI9 263 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 C17orf64Q86WR6 236 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 FITM2Q8N6M3 262 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LIPHQ8WWY8 451 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 OSTF1Q92882 214 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 FBXW5Q969U6 566 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MRPL24Q96A35 216 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 TM9SF2Q99805 663 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 EFCAB11Q9BUY7 163 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 TMEM165Q9HC07 324 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 HPF1Q9NWY4 346 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MOKQ9UQ07 419 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 IGHV3-15A0A0B4J1V0 119 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LIPT2A6NK58 231 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 K7EPI3 171 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 NDUFS8O00217 210 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 KIAA0513O60268 411 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MSMBP08118 114 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CCDC166P0CW27 439 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 PPP3CBP16298 524 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SLC6A2P23975 617 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 ELK4P28324 431 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CDKN2CP42773 168 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MAGEA1P43355 309 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MAGEB1P43366 347 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CDH13P55290 713 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MRPS25P82663 173 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 MYBPHQ13203 477 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CYP27C1Q4G0S4 372 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 TIFABQ6ZNK6 161 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 USP51Q70EK9 711 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CREB3L2Q70SY1 520 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LYPD6Q86Y78 171 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 PM20D2Q8IYS1 436 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LSMEM1Q8N8F7 131 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 RIT1Q92963 219 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 PANX3Q96QZ0 392 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 PPP4R1LQ9P1A2 415 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 GMPR2Q9P2T1 348 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 GOLGA6L4A6NEF3 574 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 VGLL3A8MV65 326 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LRRN3E7EW58 273 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 H0YHG0 523 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 RNASEK-C17orf49H0YIS7 233 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 FFAR1O14842 300 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 STK10O94804 968 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 SNAP29O95721 258 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 LTA4HP09960 611 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 TFPTP0C1Z6 253 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 CHRM3P20309 590 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 JAK1P23458 1154 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 DPP4P27487 766 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 GSK3AP49840 483 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 DIO1P49895 249 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 ZNF267Q14586 743 aaPredicted RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 HIKESHIQ53FT3 197 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 ZNF678Q5SXM1 525 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 C8orf82Q6P1X6 216 aaPredicted RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 DND1Q8IYX4 353 aaKnown RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 PIK3R3Q92569 461 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 OTUB1Q96FW1 271 aaPredicted RBP1.39□□□□□ -2.19
KNL1-211ENST00000533001 CCL19Q99731 98 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 POTEKPQ9BYX7 375 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SEMA6AQ9H2E6 1030 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SLC24A3Q9HC58 644 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SLAMF8Q9P0V8 285 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SNX12Q9UMY4 172 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 MAPRE3Q9UPY8 281 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 AP4B1Q9Y6B7 739 aa1.39□□□□□ -2.19
KNL1-211ENST00000533001 SLC22A20A6NK97 555 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 TMEM233B4DJY2 109 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 CES2O00748 559 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 ZW10O43264 779 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 DNPH1O43598 174 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 PROP1O75360 226 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 HMGN2P05204 90 aaKnown RBP1.38□□□□□ -2.19
KNL1-211ENST00000533001 SFTPBP07988 381 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 FGF4P08620 206 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 KRTAP5-9P26371 169 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 SERPINB3P29508 390 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 CFHR2P36980 270 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 FDFT1P37268 417 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 HNMTP50135 292 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 ZNF75DP51815 510 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 ERVFRD-1P60508 538 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 GALK2Q01415 458 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 ENDOGQ14249 297 aaKnown RBP1.38□□□□□ -2.19
KNL1-211ENST00000533001 CASP8Q14790 479 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 PTGR1Q14914 329 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 WLSQ5T9L3 541 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 LIPJQ5W064 366 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 HOOK3Q86VS8 718 aa1.38□□□□□ -2.19
KNL1-211ENST00000533001 MAP7D3Q8IWC1 876 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms