RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ACSS3Q9H6R3 686 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 METTL17Q9H7H0 456 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-204ENST00000529002 ASB6Q9NWX5 421 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 TAS2R16Q9NYV7 291 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 METRNQ9UJH8 293 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 NOSIPQ9Y314 301 aaKnown RBP16.57■□□□□ 0.24
SSRP1-204ENST00000529002 ACTL7BQ9Y614 415 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 ZNF716A6NP11 495 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 TRIM49D1C9J1S8 452 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 AKAP10O43572 662 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 LILRA1O75019 489 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 IFI6P09912 130 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 DIO1P49895 249 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 CCR4P51679 360 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 ZSWIM7Q19AV6 140 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 TIGD2Q4W5G0 525 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 KLHL26Q53HC5 615 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 ABLIM2Q6H8Q1 611 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 NOXRED1Q6NXP6 359 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 CDC73Q6P1J9 531 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 SLC46A3Q7Z3Q1 461 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 TMCO5AQ8N6Q1 288 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 ZNF614Q8N883 585 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 SNX18Q96RF0 628 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 BTBD2Q9BX70 525 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 NINJ2Q9NZG7 142 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 TMEM216Q9P0N5 145 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 KCNE3Q9Y6H6 103 aa16.56■□□□□ 0.24
SSRP1-204ENST00000529002 ESPNB1AK53 854 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 GTPBP1O00178 669 aaKnown RBP16.55■□□□□ 0.24
SSRP1-204ENST00000529002 STAMBPO95630 424 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 APEX1P27695 318 aaKnown RBP16.55■□□□□ 0.24
SSRP1-204ENST00000529002 SERPINB4P48594 390 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 TRIP10Q15642 601 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 IMPG1Q17R60 797 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 SLC25A53Q5H9E4 307 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
SSRP1-204ENST00000529002 ZNF527Q8NB42 609 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 SPATA4Q8NEY3 305 aa16.55■□□□□ 0.24
SSRP1-204ENST00000529002 IGKV3D-15A0A087WSY6 115 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SERTM1A2A2V5 107 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SULT2B1O00204 365 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 ENO1P06733 434 aaKnown RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 INHBAP08476 426 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 LCN1P31025 176 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SUMO3P55854 103 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SNRPD2P62316 118 aaKnown RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 CAV1Q03135 178 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 TMPPEQ6ZT21 453 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SPATA19Q7Z5L4 167 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 CCDC103Q8IW40 242 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 ZCCHC24Q8N2G6 241 aaKnown RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 LINC01356Q8N9X3 169 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 ZMYND19Q96E35 227 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 PAFAH2Q99487 392 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 MID1IP1Q9NPA3 183 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 SLC17A5Q9NRA2 495 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
SSRP1-204ENST00000529002 PTGDR2Q9Y5Y4 395 aa16.54■□□□□ 0.24
SSRP1-204ENST00000529002 PKD1L1Q8TDX9 2849 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 PDLIM1O00151 329 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 KLF11O14901 512 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 IMPDH1P20839 514 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 COMPP49747 757 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-204ENST00000529002 LCP2Q13094 533 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 CCNIQ14094 377 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 LASP1Q14847 261 aaKnown RBP16.53■□□□□ 0.24
SSRP1-204ENST00000529002 OR7E24Q6IFN5 339 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 C3orf33Q6P1S2 294 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 IKBIPQ70UQ0 350 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 CLHC1Q8NHS4 586 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 GCDHQ92947 438 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-204ENST00000529002 FAM120BQ96EK7 910 aaKnown RBP16.53■□□□□ 0.24
SSRP1-204ENST00000529002 KCNF1Q9H3M0 494 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 GSTO2Q9H4Y5 243 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 TNFRSF12AQ9NP84 129 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 EMC3Q9P0I2 261 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 SH3BP4Q9P0V3 963 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 MALT1Q9UDY8 824 aa16.53■□□□□ 0.24
SSRP1-204ENST00000529002 TMEM89A2RUT3 159 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 POC1B-GALNT4F8VUJ3 575 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 HMGN2P05204 90 aaKnown RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 TAC1P20366 129 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 ATP6V1C1P21283 382 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 SERPINF1P36955 418 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 CHN2P52757 468 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 CDH15P55291 814 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 PKNOX1P55347 436 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 PDLIM3Q53GG5 364 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 VHLLQ6RSH7 139 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 MTDHQ86UE4 582 aaKnown RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 OR5W2Q8NH69 310 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 THUMPD3Q9BV44 507 aaKnown RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 MYOZ1Q9NP98 299 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 SLC7A10Q9NS82 523 aa16.52■□□□□ 0.24
SSRP1-204ENST00000529002 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-204ENST00000529002 NPIPB8E9PQR5 432 aa16.51■□□□□ 0.23
SSRP1-204ENST00000529002 NPIPB9F8W1W9 429 aa16.51■□□□□ 0.23
SSRP1-204ENST00000529002 LYNX1G3V0Z9 82 aa16.51■□□□□ 0.23
SSRP1-204ENST00000529002 MRPL33O75394 65 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms