RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 EXOSC3Q9NQT5 275 aaKnown RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 PAQR5Q9NXK6 330 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 SLC25A37Q9NYZ2 338 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 L3MBTL1Q9Y468 752 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 FAM215AQ9Y5M1 114 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 KLF2Q9Y5W3 355 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 CAPN7Q9Y6W3 813 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TRBV5-3A0A0A0MS03 114 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 GJE1A6NN92 205 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 PRSS44E7EML9 344 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 MRASO14807 208 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 SEC14L5O43304 696 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 SNX3O60493 162 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 FBXO24O75426 580 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 SERPINB7O75635 380 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 PGM3O95394 542 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 RNF224P0DH78 156 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 GP1BBP13224 206 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 NID1P14543 1247 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ETS2P15036 469 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 CD1EP15812 388 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 HOXB9P17482 250 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 FKBP2P26885 142 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 RYKP34925 604 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 APOBEC1P41238 236 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 CLDN18P56856 261 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 COPZ1P61923 177 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 CDK6Q00534 326 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 RBBP4Q09028 425 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 SKP2Q13309 424 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 QPRTQ15274 297 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 TRMT5Q32P41 509 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 NDUFAF6Q330K2 333 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ZNF311Q5JNZ3 666 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 DCST1Q5T197 706 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 REEP3Q6NUK4 255 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 MTDHQ86UE4 582 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 GRAMD2AQ8IUY3 354 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 MSRB3Q8IXL7 192 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ZNF440Q8IYI8 595 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 LILRA2Q8N149 483 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 RPRMLQ8N4K4 120 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 MARVELD2Q8N4S9 558 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 BHLHE22Q8NFJ8 381 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 LILRB4Q8NHJ6 448 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 FBXO27Q8NI29 283 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ST8SIA1Q92185 356 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 LRRC58Q96CX6 371 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 CMTM5Q96DZ9 223 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 RNF145Q96MT1 663 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ZFP3Q96NJ6 502 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ZNF607Q96SK3 696 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 TUBA1CQ9BQE3 449 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 CPPED1Q9BRF8 314 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 SPATA9Q9BWV2 254 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 PRRG4Q9BZD6 226 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 KCNJ16Q9NPI9 418 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 TIGARQ9NQ88 270 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ACER3Q9NUN7 267 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ARMCX1Q9P291 453 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ZNF629Q9UEG4 869 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 PLEKHB1Q9UF11 243 aaPredicted RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 RNF6Q9Y252 685 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 HELZ2Q9BYK8 2649 aaKnown RBP6.55□□□□□ -1.36
GYPB-206ENST00000506516 COL12A1Q99715 3063 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 ESPL1Q14674 2120 aa6.55□□□□□ -1.36
GYPB-206ENST00000506516 A0A0G2JNJ9 132 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CDHR4A6H8M9 788 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MBD3L4A6NDZ8 208 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 MBD3L3A6NE82 208 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 PRORSD1PA6NEY8 169 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CFAP73A6NFT4 308 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MBD3L5A6NJ08 208 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 CLCA1A8K7I4 914 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 FBP2O00757 339 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 DVL2O14641 736 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 ADAMDEC1O15204 470 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 DNAJA2O60884 412 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 RCBTB2O95199 551 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SYNGR4O95473 234 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CLDN1O95832 211 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 PRKCAP17252 672 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 DRD4P21917 467 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 RPS4Y1P22090 263 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 CTSSP25774 331 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 PSMA4P25789 261 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 ELK4P28324 431 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 HTR1EP28566 365 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CEACAM8P31997 349 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 OPRM1P35372 400 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 HTR3AP46098 478 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 IDH2P48735 452 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 SUCLG1P53597 346 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 CLDN15P56746 228 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CLDN20P56880 219 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CARD18P57730 90 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SESN3P58005 492 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms