RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CT55Q8WUE5 264 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 IPCEF1Q8WWN9 437 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 HGDQ93099 445 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF524Q96C55 264 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 BPIFA2Q96DR5 249 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 KLHDC3Q9BQ90 382 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 POLDIP3Q9BY77 421 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TBL1XR1Q9BZK7 514 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 CCNB1IP1Q9NPC3 277 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ERVK-18Q9QC07 812 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 MYOTQ9UBF9 498 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 UNC119BA6NIH7 251 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 C17orf51A8MQB3 221 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PTGES3LE9PB15 166 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 GTPBP1O00178 669 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 WWP2O00308 870 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 KPNA4O00629 521 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 NDUFB5O43674 189 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 IGHEP01854 428 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 CDK4P11802 303 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PCMT1P22061 227 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SLC6A8P48029 635 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PCYT1AP49585 367 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 FBXW4P57775 412 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 EXT1Q16394 746 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SLC25A30Q5SVS4 291 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PLAG1Q6DJT9 500 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TMCO5AQ8N6Q1 288 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF540Q8NDQ6 660 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 OSTF1Q92882 214 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SLC19A3Q9BZV2 496 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ZBTB20Q9HC78 741 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TBC1D23Q9NUY8 699 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 FAM86C1Q9NVL1 165 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TCFL5Q9UL49 500 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 RIF1Q5UIP0 2472 aaKnown RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 EML6Q6ZMW3 1958 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 IGKV1D-42A0A075B6H8 117 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CLCA1A8K7I4 914 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 HCRTR2O43614 444 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PRKYO43930 277 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FOXD2O60548 495 aaPredicted RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 IGF2P01344 180 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FUT1P19526 365 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CCR4P51679 360 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 NUDT6P53370 316 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PMS2P3Q13401 168 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FHL1Q13642 323 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 NEDD8Q15843 81 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 OCLNQ16625 522 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 BTBD16Q32M84 506 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 AHSA2Q719I0 299 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PRSS48Q7RTY5 328 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PPP1R32Q7Z5V6 425 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FAM26EQ8N5C1 309 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 OR4Q3Q8NH05 313 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 M1APQ8TC57 530 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TTC9Q92623 222 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 IL4I1Q96RQ9 567 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TSSK6Q9BXA6 273 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 DEFB126Q9BYW3 111 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 OR52D1Q9H346 318 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 C12orf10Q9HB07 376 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 MMP25Q9NPA2 562 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SELENONQ9NZV5 590 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SIGLEC7Q9Y286 467 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PTPRBP23467 1997 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 ENO4A6NNW6 628 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TERTO14746 1132 aaKnown RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 RGS10O43665 173 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SCO2O43819 266 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 OR2J2O76002 312 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 MT-ND2P03891 347 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CELA2AP08217 269 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 FBXO45P0C2W1 286 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PNMTP11086 282 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TCN2P20062 427 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SLC1A3P43003 542 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SLC15A1P46059 708 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 MASP1P48740 699 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 GAS1P54826 345 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 RPS18P62269 152 aaKnown RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 EMX1Q04741 257 aaPredicted RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 RAB39AQ14964 217 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 PGGHGQ32M88 737 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 ZBED5Q49AG3 693 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 C3orf38Q5JPI3 329 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CLEC12AQ5QGZ9 265 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 RPL13AP3Q6NVV1 102 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SLC30A6Q6NXT4 461 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms