RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 RAET1LQ5VY80 246 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 SLC2A7Q6PXP3 512 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FRRS1Q6ZNA5 592 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 ADGRE4PQ86SQ3 457 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GALNT10Q86SR1 603 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 PEX5LQ8IYB4 626 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GCNT2Q8N0V5 402 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 MEIOBQ8N635 442 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FAM71CQ8NEG0 241 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 OR5W2Q8NH69 310 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 SMPDL3BQ92485 455 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 RAB8BQ92930 207 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 PIGTQ969N2 578 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 SLC35B4Q969S0 331 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 PERPQ96FX8 193 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 MRGPRX4Q96LA9 322 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 TM9SF2Q99805 663 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 TUBA1CQ9BQE3 449 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 BDH2Q9BUT1 245 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 SFXN3Q9BWM7 321 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 LAT2Q9GZY6 243 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 ARMC7Q9H6L4 198 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 UBTD1Q9HAC8 227 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 CACYBPQ9HB71 228 aaKnown RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 BCL2L10Q9HD36 194 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 MED17Q9NVC6 651 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 MKLN1Q9UL63 735 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GPC6Q9Y625 555 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FREM3P0C091 2139 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 DSPPQ9NZW4 1301 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 TRBV5-3A0A0A0MS03 114 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 A0A0G2JPF8 293 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 OR2M5A3KFT3 312 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 GJE1A6NN92 205 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 HNRNPCL2B2RXH8 293 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 B4DXG7 233 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 HNRNPCL3B7ZW38 293 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 HNRNPCL1O60812 293 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CCDC22O60826 627 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 TNFRSF21O75509 655 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 RCBTB2O95199 551 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 H6PDO95479 791 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CSTAP01040 98 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 THBS1P07996 1170 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 LINGO3P0C6S8 592 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 HNRNPCL4P0DMR1 293 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 UQCRBP14927 111 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 GPX2P18283 190 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 RPS4Y1P22090 263 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 PGM1P36871 562 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 SLC6A8P48029 635 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 STARP49675 285 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 MAP2K6P52564 334 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CLDN18P56856 261 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 RPS3AP61247 264 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 RAC1P63000 192 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 KCNJ10P78508 379 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 FUT5Q11128 374 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CD226Q15762 336 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 PLPPR5Q32ZL2 321 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 SLC25A53Q5H9E4 307 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 PDZK1Q5T2W1 519 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 DNAJC14Q6Y2X3 702 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CHMP1BQ7LBR1 199 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CXXC5Q7LFL8 322 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF440Q8IYI8 595 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 TMEM234Q8WY98 164 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 ST8SIA1Q92185 356 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 WNT2BQ93097 391 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 PIK3IP1Q96FE7 263 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 THOC1Q96FV9 657 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 CCL19Q99731 98 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 SH3GL1Q99961 368 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 SLC38A1Q9H2H9 487 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 TMEM38AQ9H6F2 299 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 A4GALTQ9NPC4 353 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 SLC6A13Q9NSD5 602 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 KLHL28Q9NXS3 571 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 IFT52Q9Y366 437 aa8.98□□□□□ -0.97
CPSF4-213ENST00000484112 FLNAP21333 2647 aaKnown RBP8.98□□□□□ -0.97
CPSF4-213ENST00000484112 FN1P02751 2386 aaKnown RBP8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PRAMEF27A3QJZ7 478 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 FAAHO00519 579 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.971e-8■■■■■ 30.2
CPSF4-213ENST00000484112 NUDT14O95848 222 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 CRHP06850 196 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 FCGR2AP12318 317 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 NID1P14543 1247 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ETS2P15036 469 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 IL7RP16871 459 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PGCP20142 388 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ME2P23368 584 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PSMA4P25789 261 aaKnown RBP8.97□□□□□ -0.97
CPSF4-213ENST00000484112 CASP9P55211 416 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms