RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 OSMP13725 252 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 GSTM3P21266 225 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 EPHA2P29317 976 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 IL12BP29460 328 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 RBMS1P29558 406 aaKnown RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 EVI2BP34910 448 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 DLSTP36957 453 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 P2RX1P51575 399 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 CHN2P52757 468 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 SUMO3P55854 103 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 CXCR4P61073 352 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 RPS18P62269 152 aaKnown RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 RPP38P78345 283 aaKnown RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 EFNB1P98172 346 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 HOXC5Q00444 222 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 MYBPC1Q00872 1141 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 C17orf67Q0P5P2 114 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 IL10RAQ13651 578 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 BTBD16Q32M84 506 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 SLC25A53Q5H9E4 307 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 FGD3Q5JSP0 725 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 LAIR2Q6ISS4 152 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ULK3Q6PHR2 472 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 OPN5Q6U736 354 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 CBLN3Q6UW01 205 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 C16orf47Q6ZP98 133 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 RASSF6Q6ZTQ3 369 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PLEKHM3Q6ZWE6 761 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 TMPRSS11FQ6ZWK6 438 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PRICKLE2Q7Z3G6 844 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 THAP5Q7Z6K1 395 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 RAB43Q86YS6 212 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 CCDC71Q8IV32 467 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 GPALPP1Q8IXQ4 340 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PRR22Q8IZ63 422 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 OR5W2Q8NH69 310 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 GNPDA2Q8TDQ7 276 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PAQR8Q8TEZ7 354 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 DNAJA4Q8WW22 397 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM239Q8WW34 195 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 LIPHQ8WWY8 451 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 FGF11Q92914 225 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF566Q969W8 418 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF524Q96C55 264 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 TMCO6Q96DC7 493 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 SPACA9Q96E40 222 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 MUS81Q96NY9 551 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 NODALQ96S42 347 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM43Q9BTV4 400 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 UCK2Q9BZX2 261 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 LIN28AQ9H9Z2 209 aaKnown RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF556Q9HAH1 456 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ZBTB20Q9HC78 741 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF160Q9HCG1 818 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 KRT84Q9NSB2 600 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 P4HTMQ9NXG6 502 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PGPEP1Q9NXJ5 209 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 IL20Q9NYY1 176 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 FBXL4Q9UKA2 621 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 SLC7A7Q9UM01 511 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 PCDHGB5Q9Y5G0 923 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 ORC6Q9Y5N6 252 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 AHCTF1Q8WYP5 2266 aa6.04□□□□□ -1.44
ATG4A-207ENST00000474825 NCOR2Q9Y618 2525 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CCDC88CQ9P219 2028 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PCSK5Q92824 1860 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM8BA6NDV4 472 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 WWP2O00308 870 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 NDUFB5O43674 189 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 OR10H3O60404 316 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PTP4A3O75365 173 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 ITGA10O75578 1167 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 OR2J2O76002 312 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 NTN1O95631 604 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CELA2AP08217 269 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TSPAN19P0C672 248 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 LINGO3P0C6S8 592 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 UBTFL6P0CB48 400 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PNMTP11086 282 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 LIPCP11150 499 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 HPGDP15428 266 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 GABRB1P18505 474 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PGCP20142 388 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CHMP24386 653 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 MSX1P28360 303 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 GGT2P36268 569 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CASP3P42574 277 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SLC1A3P43003 542 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 RFX3P48380 749 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CRISP1P54107 249 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 UGT2B15P54855 530 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 FBXW4P57775 412 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CDK5Q00535 292 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF117Q03924 483 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 FHL1Q13642 323 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 RAPSNQ13702 412 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms