RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 ARHGEF35A5YM69 484 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SNTNA6NMZ2 147 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 ARHGEF33A8MVX0 844 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 NBR2O15453 112 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 ZNF749O43361 778 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 TYROBPO43914 113 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SCGNO76038 276 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 MX1P20591 662 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 RPL4P36578 427 aaKnown RBP4.09□□□□□ -1.75
CUL3-208ENST00000454323 HPCAL1P37235 193 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 TNNT2P45379 298 aaPredicted RBP4.09□□□□□ -1.75
CUL3-208ENST00000454323 SLC7A2P52569 658 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 PRMT2P55345 433 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 RPS6P62753 249 aaKnown RBP4.09□□□□□ -1.75
CUL3-208ENST00000454323 TMEM44Q2T9K0 475 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SNAI3Q3KNW1 292 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 HSP90AB3PQ58FF7 597 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 UBE2J2Q8N2K1 259 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 NECAB1Q8N987 351 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 RAB3IL1Q8TBN0 382 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SLC2A14Q8TDB8 520 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SSC4DQ8WTU2 575 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SCFD1Q8WVM8 642 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 BADQ92934 168 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 ZNF501Q96CX3 271 aaPredicted RBP4.09□□□□□ -1.75
CUL3-208ENST00000454323 ATXN7L3BQ96GX2 97 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 PGLYRP2Q96PD5 576 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 SLC6A7Q99884 636 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 WDR13Q9H1Z4 485 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 ADGRL4Q9HBW9 690 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 GLRX2Q9NS18 164 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 DDX18Q9NVP1 670 aaKnown RBP4.09□□□□□ -1.75
CUL3-208ENST00000454323 ZNF446Q9NWS9 450 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 RAB20Q9NX57 234 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 PIGLQ9Y2B2 252 aa4.09□□□□□ -1.75
CUL3-208ENST00000454323 COL6A3P12111 3177 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 TMEM110-MUSTN1A8MSY1 372 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 CACNG3O60359 315 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SRPX2O60687 465 aaPredicted RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 F10P00742 488 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ASGR1P07306 291 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 FCGR3AP08637 254 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 GZMAP12544 262 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ITGB4P16144 1822 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 GALP22466 123 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 COL5A3P25940 1745 aaPredicted RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 CALML3P27482 149 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 MAGEA8P43361 318 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 P2RY1P47900 373 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 FNTAP49354 379 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 AP3M2P53677 418 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SEC61GP60059 68 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SRSF5Q13243 272 aaKnown RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 C1orf61Q13536 156 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 FRMPD4Q14CM0 1322 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SSX2Q16385 188 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SFT2D3Q587I9 215 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 MUC21Q5SSG8 566 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 PRAMEF5Q5TYX0 476 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 PRAMEF6Q5VXH4 476 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SLX4IPQ5VYV7 408 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ATL3Q6DD88 541 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 OR4F3Q6IEY1 312 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 SERINC5Q86VE9 423 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ZFAND4Q86XD8 727 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ZNF491Q8N8L2 437 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ZNF485Q8NCK3 441 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 STXBP6Q8NFX7 210 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 CNIH3Q8TBE1 160 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 FNDC8Q8TC99 324 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 TADA1Q96BN2 335 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 PARD6BQ9BYG5 372 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 LIME1Q9H400 295 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 MCCC2Q9HCC0 563 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ZFP14Q9HCL3 533 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SDF2L1Q9HCN8 221 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 SPATA7Q9P0W8 599 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 THAP10Q9P2Z0 257 aaPredicted RBP4.08□□□□□ -1.76
CUL3-208ENST00000454323 SEC14L3Q9UDX4 400 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ZNF221Q9UK13 617 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 ADAM28Q9UKQ2 775 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 RARRES3Q9UL19 164 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 POLDIP2Q9Y2S7 368 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 MEMO1Q9Y316 297 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 FBXO7Q9Y3I1 522 aa4.08□□□□□ -1.76
CUL3-208ENST00000454323 DICER1Q9UPY3 1922 aaKnown RBP4.07□□□□□ -1.76
CUL3-208ENST00000454323 RGPD2P0DJD1 1756 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 BCORQ6W2J9 1755 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 RANBP2P49792 3224 aaKnown RBP4.07□□□□□ -1.76
CUL3-208ENST00000454323 ABCC12Q96J65 1359 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 RAB3GAP2Q9H2M9 1393 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 SALL1Q9NSC2 1324 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 TRBV7-9A0A0J9YWB2 115 aa4.07□□□□□ -1.76
CUL3-208ENST00000454323 DNALI1O14645 258 aaPredicted RBP4.07□□□□□ -1.76
CUL3-208ENST00000454323 CASQ2O14958 399 aaPredicted RBP4.07□□□□□ -1.76
CUL3-208ENST00000454323 TIMM8AO60220 97 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms