RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TMED3Q9Y3Q3 217 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 ANGPTL3Q9Y5C1 460 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 AP1M2Q9Y6Q5 423 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 COL4A4P53420 1690 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 SBF1O95248 1867 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 MIA3Q5JRA6 1907 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 ZFC3H1O60293 1989 aaKnown RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 MICAL3Q7RTP6 2002 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 GBF1Q92538 1859 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 WDR90Q96KV7 1748 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 IGHV4-4A0A075B6R2 117 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CLRN2A0PK11 232 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM92AA1XBS5 289 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM149AA5PLN7 773 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 C2orf81A6NN90 581 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 YDJCA8MPS7 323 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FXYD1O00168 92 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 KCNK1O00180 336 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SLC1A7O00341 560 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 GNGT2O14610 69 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SCO2O43819 266 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DFNA5O60443 496 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TPST1O60507 370 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZG16O60844 167 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TRIM3O75382 744 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 CRCPO75575 148 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CDC123O75794 336 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 CCNKO75909 580 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DFFBO76075 338 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RECQL5O94762 991 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 SCELO95171 688 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 WISP3O95389 354 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 SNAP29O95721 258 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PAK4O96013 591 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 CSN3P07498 182 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RETP07949 1114 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 UROSP10746 265 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CEACAM1P13688 526 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 GGT1P19440 569 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 M6PRP20645 277 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OGNP20774 298 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 CD9P21926 228 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PCMT1P22061 227 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 AZGP1P25311 298 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 OXTRP30559 389 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 HOXC13P31276 330 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CSTF2P33240 577 aaKnown RBP eCLIP2.35□□□□□ -2.03
VPS41-206ENST00000418457 EPHX2P34913 555 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ADRA1AP35348 466 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PTGER4P35408 488 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ETV6P41212 452 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SLC1A2P43004 574 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MAGEA11P43364 429 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CCR10P46092 362 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TRPC1P48995 793 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TAF6P49848 677 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 POLR2JP52435 117 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 ARHGDIAP52565 204 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ATP12AP54707 1039 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 BACE1P56817 501 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 HUNKP57058 714 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TAS2R39P59534 338 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 GNG2P59768 71 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ERVK-8P63133 956 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CCNA1P78396 465 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 LIPEQ05469 1076 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TAF10Q12962 218 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 LCP2Q13094 533 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SELENBP1Q13228 472 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 VEZF1Q14119 521 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TYSND1Q2T9J0 566 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TIMM50Q3ZCQ8 353 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF404Q494X3 552 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TCTE1Q5JU00 501 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF691Q5VV52 312 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF470Q6ECI4 717 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PM20D1Q6GTS8 502 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 GLYATQ6IB77 296 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SULT1C3Q6IMI6 304 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PNCKQ6P2M8 343 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RNF165Q6ZSG1 346 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CATSPER4Q7RTX7 472 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PTAR1Q7Z6K3 402 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 ACOT1Q86TX2 421 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TLK2Q86UE8 772 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SLC22A16Q86VW1 577 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM131BQ86XD5 332 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZFAND4Q86XD8 727 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FUNDC1Q8IVP5 155 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RIMKLAQ8IXN7 391 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MMD2Q8IY49 270 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PEX5LQ8IYB4 626 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OFCC1Q8IZS5 231 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM9CQ8IZT9 166 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DEFB106AQ8N104 65 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ELMOD1Q8N336 334 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RYBPQ8N488 228 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms