RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 DOK1Q99704 481 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 DPYSL5Q9BPU6 564 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 COPS4Q9BT78 406 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SYNDIG1Q9H7V2 258 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PLCXD1Q9NUJ7 323 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SERTAD3Q9UJW9 196 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 GMEB2Q9UKD1 530 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CLCA1A8K7I4 914 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 DSCR3O14972 297 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ENTPD6O75354 484 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 LYPD3O95274 346 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 RPLP0P05388 317 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ADRA2AP08913 450 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 PNLIPP16233 465 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 FBLP22087 321 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 NR4A1P22736 598 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 IFNA8P32881 189 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 GPR4P46093 362 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 CSNK2BP67870 215 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ALDH6A1Q02252 535 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 COX10Q12887 443 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 GINS1Q14691 196 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 DECR1Q16698 335 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ARHGAP40Q5TG30 622 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ACSM5Q6NUN0 579 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 WDR88Q6ZMY6 472 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 BCDIN3DQ7Z5W3 292 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 RANBP3LQ86VV4 465 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 KMT5CQ86Y97 462 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM151BQ8IW70 566 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 NRMQ8IXM6 262 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 AMER2Q8N7J2 671 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM105Q8N8V8 129 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF420Q8TAQ5 688 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 PIGXQ8TBF5 258 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 GNPDA2Q8TDQ7 276 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ACOT11Q8WXI4 607 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 MVB12AQ96EY5 273 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 VMP1Q96GC9 406 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 PRSS27Q9BQR3 290 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ACOT13Q9NPJ3 140 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 POLE3Q9NRF9 147 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 DNAJC27Q9NZQ0 273 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 WARS2Q9UGM6 360 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 MMACHCQ9Y4U1 282 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF701M0R085 212 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 LCKP06239 509 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 STSP08842 583 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 M6PRP20645 277 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 RHAGQ02094 409 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 TEKQ02763 1124 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 OCA2Q04671 838 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 LPAL2Q16609 132 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 CASP12Q6UXS9 341 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 MBOAT2Q6ZWT7 520 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 RRM2BQ7LG56 351 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ERI1Q8IV48 349 aaKnown RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 BCORP1Q8N888 145 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 TCEANCQ8N8B7 351 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 B3GNT7Q8NFL0 401 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 OR8D4Q8NGM9 314 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 RORBQ92753 470 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 FKBP10Q96AY3 582 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF578Q96N58 590 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 OR1F2PQ96R84 312 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 UBL7Q96S82 380 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 NEURL2Q9BR09 285 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 UQCC2Q9BRT2 126 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 FUNDC2Q9BWH2 189 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 OR8D2Q9GZM6 311 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-202ENST00000345734 ANKRD19PQ9H560 264 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 Q9N2J8 555 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 CBLCQ9ULV8 474 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 OR10H1Q9Y4A9 318 aa8.5□□□□□ -1.05
ATG4A-202ENST00000345734 MPDZO75970 2070 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 A0A1B0GX78 115 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 A0A1W2PPW3 197 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 TRAPPC13A5PLN9 417 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 PRKYO43930 277 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 CDK1P06493 297 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 DRD5P21918 477 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 ACVR2AP27037 513 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 PSMB9P28065 219 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 GALNSP34059 522 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 IFNGR2P38484 337 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 EIF2B2P49770 351 aaKnown RBP8.49□□□□□ -1.05
ATG4A-202ENST00000345734 SNRPGP62308 76 aaKnown RBP8.49□□□□□ -1.05
ATG4A-202ENST00000345734 CDK5Q00535 292 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 ST3GAL4Q11206 333 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 TSPAN31Q12999 210 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 NDUFAF6Q330K2 333 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
ATG4A-202ENST00000345734 QSOX2Q6ZRP7 698 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms