RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 MRGPRX4Q96LA9 322 aa16.96■□□□□ 0.31
CDHR4-201ENST00000343366 NPIPA1Q9UND3 350 aa16.96■□□□□ 0.31
CDHR4-201ENST00000343366 SNX13Q9Y5W8 968 aa16.96■□□□□ 0.31
CDHR4-201ENST00000343366 ETV2O00321 342 aaPredicted RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 AQP7O14520 342 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ZG16O60844 167 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TCN1P20061 433 aaPredicted RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ELK4P28324 431 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TDGF1P3P51864 188 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 DLX5P56178 289 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 NCALDP61601 193 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 EPS8Q12929 822 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TRAP1Q12931 704 aaKnown RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 CEACAM7Q14002 265 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 SLC25A53Q5H9E4 307 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ENPP6Q6UWR7 440 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 CBLL1Q75N03 491 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TRILQ7L0X0 811 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 RNF148Q8N7C7 305 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ZNF563Q8TA94 476 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 CNOT9Q92600 299 aaKnown RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TAMM41Q96BW9 452 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 SARAFQ96BY9 339 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ASB9Q96DX5 294 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 POLR2J2Q9GZM3 115 aaKnown RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 POLR2J3Q9H1A7 115 aaKnown RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 LRMDAQ9H2I8 198 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 EXO5Q9H790 373 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 MED17Q9NVC6 651 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 ACTR3BQ9P1U1 418 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TESQ9UGI8 421 aaKnown RBP16.95■□□□□ 0.3
CDHR4-201ENST00000343366 USP22Q9UPT9 525 aa16.95■□□□□ 0.3
CDHR4-201ENST00000343366 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 CLDN24A6NM45 220 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 GSC2O15499 205 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 ZIC3O60481 467 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 FMO6PO60774 539 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 FESP07332 822 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 STSP08842 583 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 HOXB6P17509 224 aaKnown RBP16.94■□□□□ 0.3
CDHR4-201ENST00000343366 MST1P26927 711 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 SF3B4Q15427 424 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDHR4-201ENST00000343366 DUSP7Q16829 419 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 PLPPR5Q32ZL2 321 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 CYBRD1Q53TN4 286 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 CLIP4Q8N3C7 705 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 GTPBP8Q8N3Z3 284 aaPredicted RBP16.94■□□□□ 0.3
CDHR4-201ENST00000343366 SMYD1Q8NB12 490 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 NSMCE2Q96MF7 247 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 ZNF559Q9BR84 538 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 TRIM15Q9C019 465 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 DEFB127Q9H1M4 99 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 ACER3Q9NUN7 267 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 RLIMQ9NVW2 624 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 EGFL7Q9UHF1 273 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 NCKAP5O14513 1909 aa16.94■□□□□ 0.3
CDHR4-201ENST00000343366 HEATR5AQ86XA9 2040 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 BCKDKO14874 412 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 CDC40O60508 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDHR4-201ENST00000343366 OPN1SWP03999 348 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 CD247P20963 164 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 APOBEC1P41238 236 aaKnown RBP16.93■□□□□ 0.3
CDHR4-201ENST00000343366 SLC1A3P43003 542 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 PER3P56645 1201 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 RGS8P57771 180 aaPredicted RBP16.93■□□□□ 0.3
CDHR4-201ENST00000343366 QPRTQ15274 297 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 NRF1Q16656 503 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 RAET1LQ5VY80 246 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 WBP2NLQ6ICG8 309 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 HMGN2P46Q86SG4 172 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 DHFR2Q86XF0 187 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 PM20D2Q8IYS1 436 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 LSMEM1Q8N8F7 131 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 SFXN2Q96NB2 322 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 ARHGDIGQ99819 225 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 TRIM2Q9C040 744 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 SERINC1Q9NRX5 453 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 DCAF13Q9NV06 445 aaKnown RBP16.93■□□□□ 0.3
CDHR4-201ENST00000343366 VDAC3Q9Y277 283 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 CHST2Q9Y4C5 530 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 SPIN1Q9Y657 262 aaPredicted RBP16.93■□□□□ 0.3
CDHR4-201ENST00000343366 AP4B1Q9Y6B7 739 aa16.93■□□□□ 0.3
CDHR4-201ENST00000343366 GJE1A6NN92 205 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 AP3D1O14617 1153 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 ARPC2O15144 300 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 SERPINA1P01009 418 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 FREM3P0C091 2139 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 PRKCAP17252 672 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 IFNA8P32881 189 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 RYKP34925 604 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 ACAA2P42765 397 aaKnown RBP16.92■□□□□ 0.3
CDHR4-201ENST00000343366 GFRA1P56159 465 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 TMEM44Q2T9K0 475 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 WIPI1Q5MNZ9 446 aaPredicted RBP16.92■□□□□ 0.3
CDHR4-201ENST00000343366 PGM2L1Q6PCE3 622 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 ARSKQ6UWY0 536 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 GFRALQ6UXV0 394 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 GRINAQ7Z429 371 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms