RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 Q6ZNX1 250 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 OR4K15Q8NH41 348 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 BTBD2Q9BX70 525 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 FAM212BQ9NTI7 297 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 JUNDP17535 347 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 SEC61A1P61619 476 aaKnown RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 OR5AR1Q8NGP9 310 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 SLC43A1O75387 559 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 P04436 131 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 AVPI1Q5T686 147 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 NANOS1Q8WY41 292 aaKnown RBP12.84□□□□□ -0.35
CLCN6-201ENST00000312413 SLC22A7Q9Y694 548 aa12.84□□□□□ -0.35
CLCN6-201ENST00000312413 NUDT21O43809 227 aaKnown RBP12.83□□□□□ -0.35
CLCN6-201ENST00000312413 NCR1O76036 304 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 HOXC5Q00444 222 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 FIBINQ8TAL6 211 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 ALOXE3Q9BYJ1 711 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 RAB9BQ9NP90 201 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 C1GALT1Q9NS00 363 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.35
CLCN6-201ENST00000312413 SNAI1O95863 264 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 EMP2P54851 167 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 PLK5Q496M5 336 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 MRPL21Q7Z2W9 205 aaKnown RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ABHD12BQ7Z5M8 362 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ENTHD1Q8IYW4 607 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 TSACCQ96A04 125 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 TREX1Q9NSU2 369 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 MYH10P35580 1976 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 TOR1AO14656 332 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ICMTO60725 284 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ALDOCP09972 364 aaKnown RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ARAFP10398 606 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CD70P32970 193 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 GDNFP39905 211 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 ACY1Q03154 408 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 SPOCK1Q08629 439 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 SLC9A3R2Q15599 337 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CCDC71Q8IV32 467 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 MYADMQ96S97 322 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 NXF5Q9H1B4 397 aaKnown RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 INIPQ9NRY2 104 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 EHFQ9NZC4 300 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 KCMF1Q9P0J7 381 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 GCAP28676 217 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 PKLRP30613 574 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 DUSP3P51452 185 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 GAB1Q13480 694 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM151BQ8IW70 566 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 SORCS2Q96PQ0 1159 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 STRADBQ9C0K7 418 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 SLC35A3Q9Y2D2 325 aa12.83□□□□□ -0.36
CLCN6-201ENST00000312413 KNDC1Q76NI1 1749 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 H3BML4 177 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ENTPD8Q5MY95 495 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TANGO2Q6ICL3 276 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 PCNPQ8WW12 178 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CDS1Q92903 461 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 MIB2Q96AX9 1013 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 RBMXL1Q96E39 390 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 OR10A2Q9H208 303 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SERPINF1P36955 418 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CST6Q15828 149 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 EXOSC6Q5RKV6 272 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CELF2-AS1Q8N7Q2 184 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 OR6T1Q8NGN1 323 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TAAR8Q969N4 342 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 MED30Q96HR3 178 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ATOH8Q96SQ7 321 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 PITHD1Q9GZP4 211 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms