RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PPP1R14BQ96C90 147 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 BDH2Q9BUT1 245 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 PTGES2Q9H7Z7 377 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 SPRR3Q9UBC9 169 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 TNFRSF10DQ9UBN6 386 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 MKLN1Q9UL63 735 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 LIPT1Q9Y234 373 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 MRPS18CQ9Y3D5 142 aaKnown RBP15.22■□□□□ 0.03
SDCBP-201ENST00000260130 IGLV3-32A0A0A0MS00 114 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 PRAMEF27A3QJZ7 478 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 CLIC1O00299 241 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 BCKDKO14874 412 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 DPP4P27487 766 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 CRATP43155 626 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 DSCR4P56555 118 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-201ENST00000260130 FUT5Q11128 374 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 GXYLT1Q4G148 440 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 MISPQ8IVT2 679 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 OR14L1PQ8NHC6 308 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 OR2B2Q9GZK3 357 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 POLE3Q9NRF9 147 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 TAS2R10Q9NYW0 307 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 SLC25A37Q9NYZ2 338 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 ACAD8Q9UKU7 415 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 WDR45Q9Y484 360 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 CCL21O00585 134 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 NCK1P16333 377 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 FXNQ16595 210 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 GPAT3Q53EU6 434 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 CYBRD1Q53TN4 286 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 NANOGP8Q6NSW7 305 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 OLIG3Q7RTU3 272 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 CD163Q86VB7 1156 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 MAGEE2Q8TD90 523 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-201ENST00000260130 TRNT1Q96Q11 434 aaKnown RBP15.21■□□□□ 0.03
SDCBP-201ENST00000260130 SAP130Q9H0E3 1048 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 NANOGQ9H9S0 305 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 MAGEL2Q9UJ55 1249 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 DKKL1Q9UK85 242 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 SLC6A5Q9Y345 797 aa15.21■□□□□ 0.03
SDCBP-201ENST00000260130 H0YAE9 185 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 ZIC3O60481 467 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 ZIC2O95409 532 aaPredicted RBP15.21■□□□□ 0.02
SDCBP-201ENST00000260130 ETFAP13804 333 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 CD226Q15762 336 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 SYPL1Q16563 259 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 EMC4Q5J8M3 183 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 TYW3Q6IPR3 259 aaKnown RBP15.21■□□□□ 0.02
SDCBP-201ENST00000260130 MSRB3Q8IXL7 192 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 PHOSPHO1Q8TCT1 267 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 TRIM8Q9BZR9 551 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 RAD21L1Q9H4I0 556 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 VAPAQ9P0L0 249 aa15.21■□□□□ 0.02
SDCBP-201ENST00000260130 NCKAP5O14513 1909 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 hCG_2014768A0A024R1R8 64 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 UGT2B17O75795 530 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 DCKP27707 260 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 MSX1P28360 303 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 TMED1Q13445 227 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 GANABQ14697 944 aaKnown RBP15.2■□□□□ 0.02
SDCBP-201ENST00000260130 RGNQ15493 299 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF141Q15928 474 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 VASNQ6EMK4 673 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 DLEU7Q6UYE1 221 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 USP51Q70EK9 711 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 DPP10Q8N608 796 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF614Q8N883 585 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 OR5M9Q8NGP3 310 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 NSMCE2Q96MF7 247 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 DOK1Q99704 481 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 TUBA1CQ9BQE3 449 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 THUMPD1Q9NXG2 353 aaKnown RBP15.2■□□□□ 0.02
SDCBP-201ENST00000260130 KCNE5Q9UJ90 142 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF407Q9C0G0 2248 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 COL12A1Q99715 3063 aa15.2■□□□□ 0.02
SDCBP-201ENST00000260130 TRBV5-3A0A0A0MS03 114 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 GMFGO60234 142 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 KIAA0513O60268 411 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 NR2F1P10589 423 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 BMP7P18075 431 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 PPIBP23284 216 aaKnown RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 PER3P56645 1201 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 DSTNP60981 165 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 CHRNEQ04844 493 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 PDZK1Q5T2W1 519 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 FRRS1Q6ZNA5 592 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF619Q8N2I2 560 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 FNDC8Q8TC99 324 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 TIMP4Q99727 224 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 TP63Q9H3D4 680 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 HIVEP3Q5T1R4 2406 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 NOL3O60936 208 aaKnown RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ACTL6AO96019 429 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 RNF144AP50876 292 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ADARB1P78563 741 aaKnown RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 CRYZQ08257 329 aaKnown RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 FADDQ13158 208 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 RAB39AQ14964 217 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF630Q2M218 657 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms