RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CNOT9Q92600 299 aaKnown RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 PMM1Q92871 262 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 THUMPD3Q9BV44 507 aaKnown RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 CCDC106Q9BWC9 280 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 MTHFD2LQ9H903 347 aaPredicted RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 EXOSC3Q9NQT5 275 aaKnown RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 DNAJB12Q9NXW2 375 aaKnown RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 COQ3Q9NZJ6 369 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 CLCF1Q9UBD9 225 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 PLEKHB1Q9UF11 243 aaPredicted RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 Q9UFV3 132 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 ZNF443Q9Y2A4 671 aaPredicted RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 GPC6Q9Y625 555 aaPredicted RBP10.71□□□□□ -0.69
LTBP3-219ENST00000530990 AP4B1Q9Y6B7 739 aa10.71□□□□□ -0.69
LTBP3-219ENST00000530990 INTS1Q8N201 2190 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 NBPF19A0A087WUL8 3843 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 A0A0G2JPF8 293 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MBD3L4A6NDZ8 208 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MBD3L3A6NE82 208 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MBD3L5A6NJ08 208 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CD8B2A6NJW9 211 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 HNRNPCL2B2RXH8 293 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 HNRNPCL3B7ZW38 293 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 C5orf58C9J3I9 102 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 HNRNPCL1O60812 293 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 NTN1O95631 604 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 OPN1LWP04000 364 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 HNRNPCL4P0DMR1 293 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 PGCP20142 388 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 ELK4P28324 431 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 RYKP34925 604 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 EIF1P41567 113 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CDK6Q00534 326 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 SCARB2Q14108 478 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 GNA13Q14344 377 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 ADRM1Q16186 407 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CYP51A1Q16850 503 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 RABL3Q5HYI8 236 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 RIPPLY2Q5TAB7 128 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 PRAMEF8Q5VWM4 474 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 PRAMEF7Q5VXH5 474 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MAMDC2Q7Z304 686 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 LSRQ86X29 649 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 PTOV1Q86YD1 416 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 TREML1Q86YW5 311 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 C9orf106Q8NAJ2 232 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 TNIP2Q8NFZ5 429 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 LRRC58Q96CX6 371 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 RCN3Q96D15 328 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MRGPRX4Q96LA9 322 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MYLK2Q9H1R3 596 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 TMEM38AQ9H6F2 299 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 BCL2L10Q9HD36 194 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 RLIMQ9NVW2 624 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 FAM53CQ9NYF3 392 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CHST2Q9Y4C5 530 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 SPTAN1Q13813 2472 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 SPTBN1Q01082 2364 aaKnown RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 MAST4O15021 2626 aa10.7□□□□□ -0.7
LTBP3-219ENST00000530990 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
LTBP3-219ENST00000530990 CDHR4A6H8M9 788 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 FAM90A27PA6NNH2 459 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ETV2O00321 342 aaPredicted RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 EIF1AYO14602 144 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 AP3D1O14617 1153 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 EFNA2O43921 213 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 PGM3O95394 542 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 CLDN14O95500 239 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 THBS1P07996 1170 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 GRNP28799 593 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 SHC1P29353 583 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 AQP1P29972 269 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 CHRNB4P30926 498 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 CEACAM8P31997 349 aaPredicted RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 TIMP3P35625 211 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 RAC1P63000 192 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 EEF1A1P68104 462 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 LARS2Q15031 903 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 SF3B4Q15427 424 aaKnown RBP eCLIP10.69□□□□□ -0.74e-7■■■■□ 24.8
LTBP3-219ENST00000530990 SLC25A53Q5H9E4 307 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 RNF220Q5VTB9 566 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 NANOGP8Q6NSW7 305 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 REEP3Q6NUK4 255 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 NET1Q7Z628 596 aaPredicted RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ZZZ3Q8IYH5 903 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 METTL25Q8N6Q8 603 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 OR10A6Q8NH74 314 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 RP9Q8TA86 221 aaKnown RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 CA5BP1Q8WTZ4 195 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ASB5Q8WWX0 329 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ST8SIA1Q92185 356 aa10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
LTBP3-219ENST00000530990 ADGRG7Q96K78 797 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms