RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 CLRN2A0PK11 232 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 PP2D1A8MPX8 630 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 H0YCG3 227 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 ECI2O75521 394 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 BBOX1O75936 387 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 ACTL6AO96019 429 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 IGF1P05019 195 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 PRG2P13727 222 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 PGCP20142 388 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 CALB2P22676 271 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 BDKRB1P46663 353 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 PLK1P53350 603 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 LIM2P55344 173 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 RPS8P62241 208 aaKnown RBP3.93□□□□□ -1.78
VPS26A-206ENST00000489794 LRRC74AQ0VAA2 488 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 CEP55Q53EZ4 464 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 RABGAP1LQ5R372 815 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 WSCD1Q658N2 575 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 ACSM5Q6NUN0 579 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 ZNF544Q6NX49 715 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 WDR74Q6RFH5 385 aaPredicted RBP3.93□□□□□ -1.78
VPS26A-206ENST00000489794 C16orf62Q7Z3J2 963 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 THRSPQ92748 146 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 ERP44Q9BS26 406 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 SRXN1Q9BYN0 137 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 NT5C3AQ9H0P0 336 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 MARCH5Q9NX47 278 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 HPCAL4Q9UM19 191 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 GSTK1Q9Y2Q3 226 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 PLLPQ9Y342 182 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 MAB21L2Q9Y586 359 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 MAD1L1Q9Y6D9 718 aa3.93□□□□□ -1.78
VPS26A-206ENST00000489794 SF3B1O75533 1304 aaKnown RBP eCLIP3.93□□□□□ -1.78
VPS26A-206ENST00000489794 CHD4Q14839 1912 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 IGHV1OR15-1A0A075B7D0 117 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 B3GAT3O94766 335 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 LALBAP00709 142 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 H2BFMP0C1H6 154 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 ELK1P19419 428 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 TPSB2P20231 275 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 EPHX2P34913 555 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 NUCB2P80303 420 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 TPSAB1Q15661 275 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 ZNF589Q86UQ0 364 aaPredicted RBP3.92□□□□□ -1.78
VPS26A-206ENST00000489794 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 OR10A7Q8NGE5 316 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 SHC3Q92529 594 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 NOL4LQ96MY1 436 aaPredicted RBP3.92□□□□□ -1.78
VPS26A-206ENST00000489794 MCHR1Q99705 422 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 RHOJQ9H4E5 214 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS26A-206ENST00000489794 PAK1IP1Q9NWT1 392 aaPredicted RBP3.92□□□□□ -1.78
VPS26A-206ENST00000489794 CD274Q9NZQ7 290 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 EXTL2Q9UBQ6 330 aa3.92□□□□□ -1.78
VPS26A-206ENST00000489794 KDRP35968 1356 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 A0A1B0GWJ7 208 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 H3BMQ9 156 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 KRT8P05787 483 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 ASNSP08243 561 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 RNH1P13489 461 aaKnown RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 CPN1P15169 458 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 RPS2P15880 293 aaKnown RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 PBLDP30039 288 aaPredicted RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 CD80P33681 288 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 SOX6P35712 828 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 DLSTP36957 453 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 BTDP43251 543 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 HNRNPA3P51991 378 aaKnown RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 AP3M2P53677 418 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 ACTR1AP61163 376 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 CHRNB3Q05901 458 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 CCDC57Q2TAC2 916 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 C2orf83Q53S99 150 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 PNPT1Q8TCS8 783 aaKnown RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 RAET1EQ8TD07 263 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 SPRYD4Q8WW59 207 aaPredicted RBP3.91□□□□□ -1.78
VPS26A-206ENST00000489794 MARC2Q969Z3 335 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 PKNOX2Q96KN3 472 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 TPPP3Q9BW30 176 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 RIBC2Q9H4K1 309 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 ABCB10Q9NRK6 738 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 NUDT15Q9NV35 164 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 LAMP5Q9UJQ1 280 aa3.91□□□□□ -1.78
VPS26A-206ENST00000489794 A0A1B0GWB2 263 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 A8MUI8 341 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 E7ESA3 106 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 NPIPA7E9PJI5 369 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 PPIAL4DF5H284 164 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 SULT2B1O00204 365 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 MSH4O15457 936 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 EMC8O43402 210 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 EFNA2O43921 213 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 MMP23AO75900 390 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 MBD3O95983 291 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 OR8U8P0C7N1 319 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 NPIPA8P0DM63 369 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 CD1EP15812 388 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 MGMTP16455 207 aa3.9□□□□□ -1.79
VPS26A-206ENST00000489794 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms