RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 ELK4P28324 431 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ADH7P40394 386 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CCR4P51679 360 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PNLIPRP2P54317 469 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 MLF1P58340 268 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CD47Q08722 323 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 NPRL3Q12980 569 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 MED21Q13503 144 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 FHL1Q13642 323 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SSPNQ14714 243 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 TRAM2Q15035 370 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 EXT1Q16394 746 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 NTRK2Q16620 822 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 RSPO4Q2I0M5 234 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF791Q3KP31 576 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 DCST1Q5T197 706 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 TMEM164Q5U3C3 297 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 TMEM236Q5W0B7 351 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 C1orf94Q6P1W5 598 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF613Q6PF04 617 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 LINC00114Q6XXX2 140 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF730Q6ZMV8 503 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 RANBP3LQ86VV4 465 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF227Q86WZ6 799 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ARMC10Q8N2F6 343 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PARP8Q8N3A8 854 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CADM2Q8N3J6 435 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 DHRSXQ8N5I4 330 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 IQCF1Q8N6M8 205 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 TMCO5AQ8N6Q1 288 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SIRT6Q8N6T7 355 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 C7orf57Q8NEG2 295 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CNIH3Q8TBE1 160 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PHOSPHO1Q8TCT1 267 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 BRIX1Q8TDN6 353 aaKnown RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 FBLIM1Q8WUP2 373 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 APH1BQ8WW43 257 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ACOT11Q8WXI4 607 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PSMF1Q92530 271 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SLC35B4Q969S0 331 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 C3orf49Q96BT1 292 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 NTNG2Q96CW9 530 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SPACA9Q96E40 222 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 RDH12Q96NR8 316 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 MUS81Q96NY9 551 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF559Q9BR84 538 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 RHNO1Q9BSD3 238 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 DGCR6LQ9BY27 220 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 DEFB126Q9BYW3 111 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 B3GNT4Q9C0J1 378 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 LAT2Q9GZY6 243 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 TRIM45Q9H8W5 580 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SH2D2AQ9NP31 389 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ATP13A2Q9NQ11 1180 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 MEPEQ9NQ76 525 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 EXOSC3Q9NQT5 275 aaKnown RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PAPOLBQ9NRJ5 636 aaKnown RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 KIF17Q9P2E2 1029 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 KLK13Q9UKR3 277 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 NDRG4Q9ULP0 352 aaKnown RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 POFUT2Q9Y2G5 429 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 CHCHD2Q9Y6H1 151 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 NCKAP5O14513 1909 aa4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 PTPRZ1P23471 2315 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF3-209ENST00000477833 LOC100130705A0A1B0GUX0 176 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZC3H12DA2A288 527 aaKnown RBP4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ENO4A6NNW6 628 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZAR1LA6NP61 321 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 SHISA8B8ZZ34 492 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 G3V3Y1 287 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 H0YAE9 185 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 SCDO00767 359 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 SLC16A6O15403 523 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ZNF264O43296 627 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 HCRTR2O43614 444 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 CHP2O43745 196 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 WBP4O75554 376 aaKnown RBP4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ITGA10O75578 1167 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 SMNDC1O75940 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 DXOO77932 396 aaKnown RBP4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 SERPINA7P05543 415 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 HTR1AP08908 422 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 CCL3P10147 92 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 GABRB1P18505 474 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 IL11P20809 199 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 LCN1P31025 176 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 GGT2P36268 569 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 IDH2P48735 452 aaKnown RBP4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 HLCSP50747 726 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 CHN2P52757 468 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 RAD23AP54725 363 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 CDH15P55291 814 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 NRG3P56975 720 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 ISL1P61371 349 aa4.78□□□□□ -1.64
ARHGEF3-209ENST00000477833 RPS15P62841 145 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms