RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CA5BP1Q8WTZ4 195 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 RCN3Q96D15 328 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 LAT2Q9GZY6 243 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 PIF1Q9H611 641 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 MTHFD2LQ9H903 347 aaPredicted RBP10.75□□□□□ -0.69
RFC4-208ENST00000447345 RLIMQ9NVW2 624 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 THUMPD1Q9NXG2 353 aaKnown RBP10.75□□□□□ -0.69
RFC4-208ENST00000447345 DNAJB12Q9NXW2 375 aaKnown RBP10.75□□□□□ -0.69
RFC4-208ENST00000447345 Q9UFV3 132 aa10.75□□□□□ -0.69
RFC4-208ENST00000447345 ZNF443Q9Y2A4 671 aaPredicted RBP10.75□□□□□ -0.69
RFC4-208ENST00000447345 C7orf72A4D263 438 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 BBIP1A8MTZ0 92 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 FXYD1O00168 92 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 SNX3O60493 162 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CCDC22O60826 627 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 TOXO94900 526 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CLDN14O95500 239 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 EPPINO95925 133 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 HOXD4P09016 255 aaPredicted RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 GPX2P18283 190 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 ME2P23368 584 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 PSMA4P25789 261 aaKnown RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 SHC1P29353 583 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CHRNB4P30926 498 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 EIF1AXP47813 144 aaKnown RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 CLDN15P56746 228 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CDK6Q00534 326 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CYLC2Q14093 348 aaPredicted RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 SCARB2Q14108 478 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 SF3B4Q15427 424 aaKnown RBP eCLIP10.74□□□□□ -0.694e-9■■■□□ 17.3
RFC4-208ENST00000447345 RABL3Q5HYI8 236 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 NSUN5P2Q63ZY6 315 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 XKRXQ6PP77 449 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 CHMP1BQ7LBR1 199 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 P4HA3Q7Z4N8 544 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 GGNQ86UU5 652 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 GCNT2Q8N0V5 402 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 C9orf106Q8NAJ2 232 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 NAXEQ8NCW5 288 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 ZPLD1Q8TCW7 415 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 OIT3Q8WWZ8 545 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 LRRC58Q96CX6 371 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 ZNF845Q96IR2 970 aaPredicted RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 PINK1Q9BXM7 581 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 GPC6Q9Y625 555 aaPredicted RBP10.74□□□□□ -0.69
RFC4-208ENST00000447345 AP4B1Q9Y6B7 739 aa10.74□□□□□ -0.69
RFC4-208ENST00000447345 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 A0A0G2JPF8 293 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 CD8B2A6NJW9 211 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 SLC22A20A6NK97 555 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 HNRNPCL2B2RXH8 293 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 HNRNPCL3B7ZW38 293 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 LINC01387J3KSC0 135 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 TNFSF11O14788 317 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 SLC22A2O15244 555 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 FRS3O43559 492 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 HNRNPCL1O60812 293 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 ADAM11O75078 769 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 PGM3O95394 542 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 GKN3PP0CG01 181 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 HNRNPCL4P0DMR1 293 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 COX4I1P13073 169 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 PGCP20142 388 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 SLC6A2P23975 617 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 ADSLP30566 484 aaPredicted RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 EIF1P41567 113 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 AGFG1P52594 562 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 SESN3P58005 492 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 EEF1A1P68104 462 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 MERTKQ12866 999 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 LARS2Q15031 903 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 BCL2A1Q16548 175 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 SGCBQ16585 318 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 COQ5Q5HYK3 327 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 ZNF311Q5JNZ3 666 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 RIPPLY2Q5TAB7 128 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 REEP3Q6NUK4 255 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 LILRA2Q8N149 483 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 PCYOX1LQ8NBM8 494 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 OR10A6Q8NH74 314 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 ASB5Q8WWX0 329 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 FIG4Q92562 907 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 DNAJA3Q96EY1 480 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 MRGPRX4Q96LA9 322 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 CCDC106Q9BWC9 280 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 UCK2Q9BZX2 261 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 EXOSC3Q9NQT5 275 aaKnown RBP10.73□□□□□ -0.69
RFC4-208ENST00000447345 CLCF1Q9UBD9 225 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 ANGPT4Q9Y264 503 aa10.73□□□□□ -0.69
RFC4-208ENST00000447345 CDHR4A6H8M9 788 aa10.72□□□□□ -0.69
RFC4-208ENST00000447345 MBD3L4A6NDZ8 208 aaPredicted RBP10.72□□□□□ -0.69
RFC4-208ENST00000447345 MBD3L3A6NE82 208 aaPredicted RBP10.72□□□□□ -0.69
RFC4-208ENST00000447345 MBD3L5A6NJ08 208 aaPredicted RBP10.72□□□□□ -0.69
RFC4-208ENST00000447345 AIM2O14862 343 aa10.72□□□□□ -0.69
RFC4-208ENST00000447345 TGM6O95932 706 aa10.72□□□□□ -0.69
RFC4-208ENST00000447345 IL2RAP01589 272 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms