RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 EXOSC7Q15024 291 aaKnown RBP15.53■□□□□ 0.08
TCOF1-206ENST00000445265 PRICKLE2Q7Z3G6 844 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ZER1Q7Z7L7 766 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF584Q8IVC4 421 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ISYNA1Q9NPH2 558 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 APOBEC3BQ9UH17 382 aaKnown RBP15.53■□□□□ 0.08
TCOF1-206ENST00000445265 TMPRSS11DO60235 418 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 CPEP16870 476 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 CAPZA1P52907 286 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 PLCXD2Q0VAA5 305 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 RAB30Q15771 203 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ALG10Q5BKT4 473 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 MAMDC2Q7Z304 686 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-206ENST00000445265 COQ8AQ8NI60 647 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF417Q8TAU3 575 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 KLHL15Q96M94 604 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 CTRCQ99895 268 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 UBQLN3Q9H347 655 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 BCL2L10Q9HD36 194 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 NAALAD2Q9Y3Q0 740 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 TRBV5-3A0A0A0MS03 114 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 CD22P20273 847 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 PKLRP30613 574 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 PUDPQ08623 228 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 RAB11BQ15907 218 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 LHX8Q68G74 356 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 CCSAPQ6IQ19 270 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ACSM5Q6NUN0 579 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 MFSD12Q6NUT3 480 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 OLIG3Q7RTU3 272 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 OR52R1Q8NGF1 315 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ICKQ9UPZ9 632 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 FZD7O75084 574 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 GATBO75879 557 aaKnown RBP15.52■□□□□ 0.08
TCOF1-206ENST00000445265 EGFP01133 1207 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 IGFBP1P08833 259 aaPredicted RBP15.52■□□□□ 0.08
TCOF1-206ENST00000445265 F3P13726 295 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 CLDN2P57739 230 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 SNTA1Q13424 505 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 CDK10Q15131 360 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 LTB4RQ15722 352 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 DEFB110Q30KQ9 67 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 RPL22L1Q6P5R6 122 aaKnown RBP15.52■□□□□ 0.08
TCOF1-206ENST00000445265 BTLAQ7Z6A9 289 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 SPAG16Q8N0X2 631 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 FN3KQ9H479 309 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 TM7SF3Q9NS93 570 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 OLFM2O95897 454 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 ARSBP15848 533 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 TCTE1Q5JU00 501 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 FAM198BQ6UWH4 519 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 Q8N9G6 341 aaPredicted RBP15.52■□□□□ 0.08
TCOF1-206ENST00000445265 GPR148Q8TDV2 347 aa15.52■□□□□ 0.08
TCOF1-206ENST00000445265 ZSCAN5BA6NJL1 495 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 SOCS6O14544 535 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 TGM1P22735 817 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 MAPK14Q16539 360 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF542PQ5EBM4 170 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 LINC00615Q96LM1 132 aaPredicted RBP15.52■□□□□ 0.07
TCOF1-206ENST00000445265 OR52A5Q9H2C5 316 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 MED20Q9H944 212 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 KLRF1Q9NZS2 232 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 V9GY05 133 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 MYO7AQ13402 2215 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 KIR2DS5A0A0G2JLQ3 304 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 A0A0G2JNG1 304 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 WASHC1A8K0Z3 465 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 KIR2DS3K7RE56 304 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 M0R082 166 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 EIF1AYO14602 144 aaKnown RBP15.52■□□□□ 0.07
TCOF1-206ENST00000445265 ADAM23O75077 832 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 AGTR1P30556 359 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 BSGP35613 385 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 GRM7Q14831 915 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 KIR2DS5Q14953 304 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 SF3B4Q15427 424 aaKnown RBP eCLIP15.52■□□□□ 0.079e-7■■■■□ 20
TCOF1-206ENST00000445265 SLC18B1Q6NT16 456 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 ZC3H14Q6PJT7 736 aaKnown RBP15.52■□□□□ 0.07
TCOF1-206ENST00000445265 IL20RBQ6UXL0 311 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 TMEM255BQ8WV15 326 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 WASH6PQ9NQA3 447 aa15.52■□□□□ 0.07
TCOF1-206ENST00000445265 THAP10Q9P2Z0 257 aaPredicted RBP15.52■□□□□ 0.07
TCOF1-206ENST00000445265 SEMA4FO95754 770 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 TFP02787 698 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 VEGFBP49765 207 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PRSS36Q5K4E3 855 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SFXN4Q6P4A7 337 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 B3GLCTQ6Y288 498 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 BRIX1Q8TDN6 353 aaKnown RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 MEPEQ9NQ76 525 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 CYP8B1Q9UNU6 501 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SGK494L7N484 410 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PGAM2P15259 253 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 EIF1AXP47813 144 aaKnown RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PDX1P52945 283 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 NFATC4Q14934 902 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 MFSD4AQ8N468 514 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SLC16A11Q8NCK7 471 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 VN1R2Q8NFZ6 395 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PHOSPHO2Q8TCD6 241 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms